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OPENSEQ.org

YBGK - YBGL
UniProt: P75745 - P75746
Length: 554
Sequences: 757
Seq/Len: 1.38
I_Prob: 0.00

YBGK - Uncharacterized protein YbgK
Paralog alert: 0.16 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YBGK
YBGL - UPF0271 protein YbgL
Paralog alert: 0.09 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YBGL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
226_S 174_R 1.07 0.00
240_G 174_R 1.00 0.00
51_P 142_S 0.93 0.00
226_S 163_R 0.90 0.00
284_S 73_L 0.88 0.00
36_A 80_A 0.87 0.00
60_L 102_H 0.86 0.00
215_I 185_E 0.85 0.00
58_G 102_H 0.84 0.00
32_L 227_F 0.84 0.00
240_G 160_F 0.83 0.00
220_T 127_V 0.82 0.00
27_S 221_G 0.82 0.00
256_P 111_N 0.82 0.00
235_Q 163_R 0.81 0.00
256_P 174_R 0.81 0.00
129_S 17_A 0.80 0.00
244_V 204_T 0.79 0.00
209_Y 200_V 0.79 0.00
70_F 3_I 0.79 0.00
36_A 54_I 0.79 0.00
198_W 39_I 0.78 0.00
204_S 82_T 0.77 0.00
234_V 224_A 0.76 0.00
250_Q 219_G 0.76 0.00
253_G 6_N 0.76 0.00
135_G 114_A 0.76 0.00
240_G 111_N 0.76 0.00
255_Y 174_R 0.76 0.00
36_A 9_L 0.75 0.00
136_I 46_E 0.75 0.00
126_G 51_G 0.75 0.00
73_T 243_A 0.74 0.00
192_A 237_E 0.74 0.00
150_L 45_R 0.74 0.00
246_M 111_N 0.74 0.00
228_G 129_A 0.74 0.00
257_R 174_R 0.72 0.00
53_L 167_A 0.72 0.00
26_I 118_Q 0.72 0.00
180_P 120_A 0.72 0.00
113_L 9_L 0.72 0.00
256_P 180_L 0.71 0.00
212_Q 118_Q 0.71 0.00
124_V 183_N 0.71 0.00
207_M 58_P 0.71 0.00
255_Y 163_R 0.70 0.00
214_Q 215_V 0.70 0.00
240_G 163_R 0.70 0.00
235_Q 174_R 0.70 0.00
94_M 191_T 0.70 0.00
110_R 89_L 0.70 0.00
37_L 114_A 0.70 0.00
250_Q 174_R 0.70 0.00
240_G 171_L 0.70 0.00
70_F 50_N 0.70 0.00
302_L 3_I 0.70 0.00
260_C 208_A 0.69 0.00
199_Q 121_D 0.69 0.00
98_Q 19_L 0.69 0.00
49_N 99_V 0.69 0.00
2_L 203_I 0.69 0.00
226_S 111_N 0.69 0.00
36_A 40_M 0.69 0.00
105_P 92_I 0.68 0.00
245_L 104_K 0.68 0.00
4_I 48_I 0.68 0.00
108_G 110_Y 0.68 0.00
253_G 158_E 0.68 0.00
256_P 163_R 0.68 0.00
267_Y 214_T 0.67 0.00
233_V 217_L 0.67 0.00
45_G 89_L 0.67 0.00
252_T 113_A 0.67 0.00
294_D 241_V 0.67 0.00
201_S 197_H 0.67 0.00
208_G 59_S 0.67 0.00
169_L 242_V 0.66 0.00
129_S 59_S 0.66 0.00
9_M 72_Q 0.66 0.00
207_M 160_F 0.66 0.00
69_W 43_C 0.66 0.00
165_V 71_M 0.66 0.00
262_I 28_I 0.66 0.00
47_D 42_A 0.66 0.00
223_E 159_V 0.66 0.00
205_N 19_L 0.66 0.00
227_H 219_G 0.66 0.00
235_Q 108_M 0.66 0.00
55_I 102_H 0.65 0.00
124_V 7_A 0.65 0.00
183_H 28_I 0.65 0.00
236_V 232_R 0.65 0.00
286_E 76_E 0.65 0.00
245_L 58_P 0.65 0.00
31_A 188_L 0.65 0.00
282_Q 115_K 0.65 0.00
96_A 167_A 0.65 0.00
27_S 217_L 0.65 0.00
250_Q 160_F 0.65 0.00
144_L 51_G 0.65 0.00
207_M 104_K 0.65 0.00
66_T 148_G 0.65 0.00
9_M 187_A 0.65 0.00
250_Q 111_N 0.64 0.00
49_N 131_D 0.64 0.00
253_G 216_C 0.64 0.00
250_Q 188_L 0.64 0.00
253_G 108_M 0.64 0.00
246_M 210_V 0.64 0.00
206_R 6_N 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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