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OPENSEQ.org

PTQB - PTQC
UniProt: P69795 - P17334
Length: 558
Sequences: 528
Seq/Len: 1.01
I_Prob: 0.00

PTQB - N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component
Paralog alert: 0.53 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: PTQB
PTQC - N,N'-diacetylchitobiose permease IIC component
Paralog alert: 0.63 [within 20: 0.25] - ratio of genomes with paralogs
Cluster includes: PTQC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
5_H 413_L 1.34 0.00
45_G 111_K 1.24 0.00
46_E 111_K 1.18 0.00
25_A 177_D 1.15 0.00
92_V 163_F 1.04 0.00
18_L 335_P 0.98 0.00
92_V 373_L 0.94 0.00
82_L 129_T 0.92 0.00
65_P 18_K 0.92 0.00
21_S 181_A 0.91 0.00
97_V 392_M 0.91 0.00
53_V 139_V 0.91 0.00
22_K 331_K 0.91 0.00
44_A 359_I 0.90 0.00
77_E 44_M 0.90 0.00
77_E 418_I 0.89 0.00
61_A 9_E 0.88 0.00
14_M 163_F 0.88 0.00
62_Y 96_L 0.86 0.00
94_K 340_Q 0.86 0.00
33_P 152_G 0.86 0.00
101_K 356_V 0.85 0.00
28_E 221_T 0.85 0.00
91_G 37_P 0.85 0.00
62_Y 296_P 0.84 0.00
81_S 352_I 0.83 0.00
5_H 88_N 0.82 0.00
61_A 381_I 0.81 0.00
77_E 322_R 0.81 0.00
22_K 351_I 0.81 0.00
26_Q 159_V 0.81 0.00
25_A 169_R 0.81 0.00
97_V 333_A 0.80 0.00
34_V 380_I 0.79 0.00
96_A 195_I 0.79 0.00
12_A 49_N 0.78 0.00
6_I 338_I 0.78 0.00
17_S 174_K 0.78 0.00
61_A 353_M 0.77 0.00
91_G 11_V 0.77 0.00
77_E 392_M 0.77 0.00
9_F 97_M 0.77 0.00
77_E 156_G 0.76 0.00
11_S 250_H 0.76 0.00
36_I 121_S 0.76 0.00
14_M 27_A 0.76 0.00
98_A 6_A 0.75 0.00
20_V 365_Q 0.75 0.00
88_D 401_N 0.74 0.00
17_S 251_G 0.74 0.00
66_E 158_V 0.74 0.00
73_N 366_P 0.74 0.00
33_P 288_K 0.74 0.00
29_K 157_L 0.73 0.00
18_L 352_I 0.73 0.00
11_S 320_A 0.73 0.00
24_R 327_R 0.73 0.00
53_V 195_I 0.73 0.00
19_L 228_S 0.73 0.00
28_E 338_I 0.73 0.00
45_G 386_N 0.72 0.00
34_V 334_L 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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