| UniProt: | P69795 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10140 | ||
| Length: | 106 (99) | ||
| Sequences: | 712 | ||
| Seq/Len: | 7.19 |
| PTQB
Paralog alert: 0.53 [within 20: 0.08] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 64_L | 68_Q | 3.542 | 1.00 | |
| 30_Y | 94_K | 3.056 | 1.00 | |
| 80_D | 95_A | 2.361 | 1.00 | |
| 19_L | 92_V | 2.324 | 1.00 | |
| 83_L | 88_D | 1.991 | 1.00 | |
| 45_G | 70_L | 1.97 | 1.00 | |
| 21_S | 24_R | 1.964 | 1.00 | |
| 90_L | 94_K | 1.897 | 1.00 | |
| 20_V | 36_I | 1.819 | 1.00 | |
| 23_M | 36_I | 1.788 | 1.00 | |
| 80_D | 83_L | 1.7 | 1.00 | |
| 26_Q | 30_Y | 1.644 | 1.00 | |
| 53_V | 99_A | 1.616 | 1.00 | |
| 25_A | 28_E | 1.588 | 1.00 | |
| 88_D | 91_G | 1.57 | 1.00 | |
| 83_L | 91_G | 1.54 | 1.00 | |
| 44_A | 67_I | 1.538 | 1.00 | |
| 5_H | 35_I | 1.514 | 0.99 | |
| 15_S | 84_Y | 1.481 | 0.99 | |
| 14_M | 17_S | 1.47 | 0.99 | |
| 21_S | 25_A | 1.424 | 0.99 | |
| 63_M | 66_E | 1.402 | 0.99 | |
| 77_E | 99_A | 1.391 | 0.99 | |
| 68_Q | 72_P | 1.387 | 0.99 | |
| 7_Y | 51_A | 1.377 | 0.99 | |
| 30_Y | 90_L | 1.365 | 0.99 | |
| 26_Q | 89_G | 1.353 | 0.98 | |
| 7_Y | 39_F | 1.316 | 0.98 | |
| 25_A | 29_K | 1.291 | 0.98 | |
| 44_A | 54_V | 1.25 | 0.97 | |
| 93_L | 97_V | 1.242 | 0.97 | |
| 8_L | 16_T | 1.224 | 0.97 | |
| 10_C | 13_G | 1.17 | 0.95 | |
| 34_V | 97_V | 1.134 | 0.94 | |
| 65_P | 68_Q | 1.123 | 0.94 | |
| 91_G | 94_K | 1.112 | 0.93 | |
| 69_R | 72_P | 1.077 | 0.92 | |
| 32_V | 97_V | 1.072 | 0.91 | |
| 64_L | 78_V | 1.067 | 0.91 | |
| 9_F | 44_A | 1.066 | 0.91 | |
| 64_L | 76_V | 1.051 | 0.90 | |
| 26_Q | 29_K | 1.045 | 0.90 | |
| 37_E | 51_A | 1.027 | 0.89 | |
| 83_L | 92_V | 1.024 | 0.89 | |
| 18_L | 21_S | 1.024 | 0.89 | |
| 83_L | 95_A | 1.006 | 0.88 | |
| 27_A | 93_L | 1.003 | 0.87 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3nbmA | 1 | 0.9245 | 99.9 | 0.275 | Contact Map | 0.604 |
| 1e2bA | 1 | 1 | 99.9 | 0.275 | Contact Map | 0.715 |
| 4mgeA | 2 | 0.9717 | 99.9 | 0.312 | Contact Map | 0.816 |
| 2l2qA | 1 | 1 | 99.9 | 0.35 | Contact Map | 0.545 |
| 2kyrA | 1 | 0.934 | 99.9 | 0.367 | Contact Map | 0.507 |
| 2m1zA | 1 | 0.9151 | 99.8 | 0.395 | Contact Map | 0.407 |
| 2r4qA | 1 | 0.9245 | 99.8 | 0.42 | Contact Map | 0.577 |
| 1tvmA | 1 | 0.8774 | 99.5 | 0.536 | Contact Map | 0.34 |
| 3czcA | 1 | 0.8774 | 99.3 | 0.604 | Contact Map | 0.438 |
| 1vkrA | 1 | 0.9245 | 99.1 | 0.634 | Contact Map | 0.46 |
Sequence Conservation (Image Generated using WebLogo v3)