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OPENSEQ.org

PTQA - PTQC
UniProt: P69791 - P17334
Length: 568
Sequences: 542
Seq/Len: 1.03
I_Prob: 0.00

PTQA - N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component
Paralog alert: 0.47 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: PTQA
PTQC - N,N'-diacetylchitobiose permease IIC component
Paralog alert: 0.63 [within 20: 0.25] - ratio of genomes with paralogs
Cluster includes: PTQC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
57_S 381_I 1.25 0.00
93_H 250_H 1.19 0.00
114_L 322_R 1.06 0.00
97_S 154_I 1.05 0.00
31_A 90_T 1.03 0.00
90_A 90_T 1.01 0.00
24_L 330_A 0.93 0.00
84_S 332_L 0.92 0.00
94_L 96_L 0.92 0.00
55_D 329_V 0.91 0.00
97_S 95_S 0.86 0.00
90_A 380_I 0.86 0.00
110_L 414_F 0.85 0.00
55_D 286_A 0.85 0.00
22_M 10_K 0.85 0.00
47_F 315_L 0.85 0.00
51_K 367_I 0.84 0.00
21_V 115_L 0.81 0.00
81_M 177_D 0.80 0.00
35_A 431_N 0.80 0.00
52_A 18_K 0.80 0.00
82_K 101_F 0.80 0.00
90_A 95_S 0.79 0.00
22_M 9_E 0.79 0.00
91_Q 287_G 0.79 0.00
22_M 25_V 0.79 0.00
55_D 203_I 0.79 0.00
93_H 179_V 0.78 0.00
87_L 382_P 0.78 0.00
108_I 304_L 0.78 0.00
44_Q 206_A 0.78 0.00
46_D 214_F 0.78 0.00
57_S 90_T 0.77 0.00
107_L 357_M 0.77 0.00
78_E 236_A 0.76 0.00
51_K 417_G 0.76 0.00
62_N 162_M 0.76 0.00
102_E 257_A 0.75 0.00
28_S 321_S 0.75 0.00
45_G 409_L 0.75 0.00
27_N 36_M 0.74 0.00
112_E 367_I 0.74 0.00
47_F 206_A 0.74 0.00
49_A 159_V 0.74 0.00
39_L 30_N 0.74 0.00
43_K 432_K 0.74 0.00
61_L 19_I 0.73 0.00
70_K 301_F 0.73 0.00
27_N 158_V 0.73 0.00
111_H 90_T 0.73 0.00
112_E 338_I 0.73 0.00
107_L 218_I 0.73 0.00
32_R 312_G 0.73 0.00
19_E 23_P 0.73 0.00
113_K 414_F 0.72 0.00
30_Q 268_L 0.72 0.00
54_M 203_I 0.72 0.00
24_L 267_A 0.72 0.00
53_M 125_F 0.72 0.00
13_E 9_E 0.71 0.00
72_I 249_I 0.71 0.00
103_L 25_V 0.71 0.00
24_L 332_L 0.71 0.00
44_Q 168_R 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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