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OPENSEQ.org

IF1 - LFTR
UniProt: P69222 - P0A8P1
Length: 306
Sequences: 185
Seq/Len: 0.61
I_Prob: 0.01

IF1 - Translation initiation factor IF-1
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: IF1
LFTR - Leucyl/phenylalanyl-tRNA--protein transferase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LFTR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
69_F 154_C 1.61 0.01
15_E 11_I 1.55 0.00
15_E 187_C 1.42 0.00
56_E 51_S 1.40 0.00
14_L 92_N 1.38 0.00
12_T 99_I 1.37 0.00
43_N 3_L 1.32 0.00
7_I 46_I 1.27 0.00
14_L 154_C 1.22 0.00
69_F 39_L 1.21 0.00
63_S 114_R 1.21 0.00
9_M 24_N 1.18 0.00
13_V 53_G 1.18 0.00
10_Q 154_C 1.17 0.00
57_L 76_R 1.13 0.00
32_V 161_R 1.12 0.00
52_K 187_C 1.12 0.00
54_T 154_C 1.12 0.00
6_N 112_I 1.11 0.00
25_E 99_I 1.11 0.00
68_V 208_L 1.11 0.00
10_Q 65_A 1.10 0.00
68_V 56_I 1.08 0.00
69_F 65_A 1.06 0.00
69_F 94_A 1.06 0.00
56_E 21_R 1.05 0.00
52_K 185_I 1.03 0.00
6_N 101_G 1.02 0.00
13_V 83_K 1.02 0.00
13_V 199_A 1.01 0.00
57_L 124_H 1.01 0.00
71_S 39_L 1.01 0.00
13_V 132_I 1.00 0.00
7_I 169_A 1.00 0.00
54_T 208_L 1.00 0.00
57_L 68_W 1.00 0.00
13_V 116_V 0.99 0.00
43_N 164_N 0.99 0.00
15_E 139_E 0.94 0.00
10_Q 148_A 0.94 0.00
9_M 69_P 0.93 0.00
57_L 67_L 0.93 0.00
14_L 191_N 0.93 0.00
57_L 62_D 0.93 0.00
63_S 195_A 0.93 0.00
6_N 116_V 0.92 0.00
63_S 39_L 0.92 0.00
33_T 87_Y 0.91 0.00
14_L 65_A 0.91 0.00
2_A 189_V 0.90 0.00
69_F 191_N 0.90 0.00
43_N 141_V 0.89 0.00
65_G 154_C 0.89 0.00
63_S 107_E 0.88 0.00
31_V 196_S 0.88 0.00
68_V 170_L 0.88 0.00
21_M 147_V 0.87 0.00
54_T 215_R 0.87 0.00
23_R 75_S 0.87 0.00
13_V 181_G 0.86 0.00
56_E 53_G 0.85 0.00
3_K 75_S 0.85 0.00
17_L 134_V 0.84 0.00
7_I 197_L 0.84 0.00
57_L 95_F 0.84 0.00
71_S 116_V 0.83 0.00
14_L 29_L 0.83 0.00
54_T 91_M 0.83 0.00
57_L 1_M 0.83 0.00
12_T 222_N 0.82 0.00
68_V 9_H 0.82 0.00
17_L 23_P 0.82 0.00
6_N 54_D 0.82 0.00
14_L 176_E 0.81 0.00
10_Q 91_M 0.81 0.00
13_V 209_N 0.81 0.00
6_N 2_R 0.80 0.00
69_F 176_E 0.80 0.00
69_F 180_H 0.80 0.00
2_A 46_I 0.80 0.00
63_S 17_E 0.80 0.00
14_L 5_Q 0.80 0.00
43_N 81_F 0.80 0.00
54_T 16_P 0.80 0.00
25_E 208_L 0.80 0.00
13_V 212_N 0.79 0.00
10_Q 177_F 0.79 0.00
6_N 194_T 0.79 0.00
57_L 181_G 0.79 0.00
56_E 202_I 0.79 0.00
54_T 65_A 0.79 0.00
6_N 1_M 0.79 0.00
57_L 175_E 0.78 0.00
15_E 213_Q 0.78 0.00
54_T 179_G 0.78 0.00
15_E 227_R 0.78 0.00
21_M 211_L 0.78 0.00
56_E 11_I 0.78 0.00
63_S 9_H 0.78 0.00
71_S 109_G 0.78 0.00
6_N 168_T 0.77 0.00
72_R 19_A 0.77 0.00
57_L 74_I 0.77 0.00
2_A 65_A 0.77 0.00
71_S 76_R 0.77 0.00
43_N 226_P 0.77 0.00
13_V 87_Y 0.77 0.00
12_T 16_P 0.77 0.00
12_T 37_R 0.76 0.00
63_S 179_G 0.76 0.00
68_V 214_M 0.76 0.00
10_Q 180_H 0.76 0.00
3_K 37_R 0.76 0.00
14_L 180_H 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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