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OPENSEQ.org

RL22 - SECY
UniProt: P61175 - P0AGA2
Length: 553
Sequences: 974
Seq/Len: 1.80
I_Prob: 0.01

RL22 - 50S ribosomal protein L22
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL22
SECY - Protein translocase subunit SecY
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
24_I 348_K 1.21 0.01
103_I 373_L 1.15 0.01
52_E 82_I 1.09 0.01
92_R 317_Y 1.09 0.01
51_L 64_F 1.07 0.01
88_R 236_F 1.01 0.01
100_T 237_V 1.01 0.01
98_K 366_I 1.00 0.01
94_D 33_F 0.99 0.01
1_M 123_G 0.97 0.01
9_H 255_R 0.97 0.01
103_I 58_G 0.97 0.01
3_T 18_E 0.96 0.01
29_V 170_F 0.96 0.01
14_A 94_L 0.95 0.01
15_Q 127_L 0.95 0.01
1_M 35_I 0.95 0.01
21_A 197_A 0.94 0.01
24_I 427_S 0.94 0.01
63_G 237_V 0.94 0.01
51_L 386_L 0.93 0.01
24_I 62_E 0.92 0.01
22_D 406_L 0.92 0.01
24_I 396_K 0.92 0.01
47_V 213_G 0.90 0.01
99_R 255_R 0.90 0.01
29_V 110_E 0.90 0.01
31_Q 190_I 0.89 0.01
73_K 321_Y 0.88 0.01
103_I 261_Q 0.88 0.01
47_V 243_R 0.88 0.01
6_K 66_M 0.87 0.01
9_H 246_V 0.87 0.01
66_I 19_L 0.87 0.01
24_I 425_M 0.86 0.01
72_T 387_I 0.85 0.01
88_R 238_E 0.85 0.01
10_A 26_V 0.85 0.01
107_V 154_F 0.85 0.01
70_K 158_F 0.85 0.01
12_S 326_I 0.85 0.01
97_L 409_V 0.85 0.01
74_I 163_S 0.84 0.01
105_V 18_E 0.84 0.01
79_G 244_I 0.84 0.01
36_L 363_A 0.83 0.00
42_K 312_P 0.83 0.00
35_I 76_S 0.83 0.00
71_V 293_W 0.83 0.00
30_S 132_S 0.82 0.00
95_R 246_V 0.82 0.00
34_D 183_I 0.82 0.00
18_R 81_G 0.82 0.00
106_V 162_V 0.82 0.00
38_Y 173_W 0.81 0.00
10_A 311_Q 0.81 0.00
65_D 295_G 0.81 0.00
82_M 346_L 0.81 0.00
89_A 382_T 0.81 0.00
12_S 387_I 0.81 0.00
41_K 194_G 0.81 0.00
93_A 255_R 0.81 0.00
16_K 173_W 0.81 0.00
28_K 344_D 0.81 0.00
105_V 31_I 0.80 0.00
76_V 344_D 0.80 0.00
43_A 392_R 0.80 0.00
87_P 269_V 0.80 0.00
88_R 275_I 0.80 0.00
6_K 55_Q 0.80 0.00
17_V 261_Q 0.80 0.00
4_I 162_V 0.80 0.00
27_K 399_F 0.80 0.00
21_A 80_L 0.80 0.00
17_V 335_L 0.79 0.00
63_G 99_H 0.79 0.00
105_V 365_Y 0.79 0.00
61_N 171_L 0.79 0.00
105_V 356_I 0.79 0.00
36_L 386_L 0.79 0.00
29_V 44_I 0.78 0.00
86_M 130_F 0.78 0.00
30_S 283_I 0.78 0.00
103_I 365_Y 0.78 0.00
103_I 306_I 0.78 0.00
45_V 222_L 0.78 0.00
63_G 283_I 0.78 0.00
85_I 370_M 0.77 0.00
65_D 197_A 0.77 0.00
17_V 423_L 0.77 0.00
4_I 370_M 0.77 0.00
8_R 264_H 0.77 0.00
4_I 256_R 0.76 0.00
52_E 64_F 0.76 0.00
71_V 356_I 0.76 0.00
51_L 148_L 0.76 0.00
14_A 127_L 0.76 0.00
77_D 108_E 0.76 0.00
104_T 321_Y 0.75 0.00
47_V 349_S 0.75 0.00
27_K 57_R 0.75 0.00
105_V 293_W 0.75 0.00
34_D 381_I 0.75 0.00
63_G 148_L 0.75 0.00
83_K 114_R 0.75 0.00
14_A 37_S 0.75 0.00
48_K 323_S 0.74 0.00
38_Y 414_M 0.74 0.00
24_I 323_S 0.74 0.00
81_S 156_F 0.74 0.00
43_A 141_N 0.74 0.00
71_V 387_I 0.74 0.00
14_A 411_V 0.74 0.00
50_V 79_A 0.74 0.00
56_A 353_V 0.74 0.00
47_V 304_T 0.74 0.00
89_A 206_T 0.74 0.00
6_K 256_R 0.74 0.00
15_Q 329_C 0.74 0.00
101_S 22_R 0.74 0.00
88_R 276_P 0.74 0.00
1_M 286_F 0.73 0.00
3_T 37_S 0.73 0.00
29_V 381_I 0.73 0.00
4_I 228_F 0.73 0.00
30_S 353_V 0.73 0.00
86_M 174_L 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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