| UniProt: | P61175 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10882 | ||
| Length: | 110 (109) | ||
| Sequences: | 1655 | ||
| Seq/Len: | 15.18 |
| RL22
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 7_H | 50_V | 2.922 | 1.00 | |
| 9_H | 80_P | 2.875 | 1.00 | |
| 21_A | 76_V | 2.746 | 1.00 | |
| 72_T | 108_S | 2.487 | 1.00 | |
| 7_H | 10_A | 2.148 | 1.00 | |
| 29_V | 55_I | 2.136 | 1.00 | |
| 78_E | 81_S | 2.101 | 1.00 | |
| 48_K | 52_E | 2.061 | 1.00 | |
| 27_K | 35_I | 2.014 | 1.00 | |
| 22_D | 25_R | 1.965 | 1.00 | |
| 37_T | 48_K | 1.962 | 1.00 | |
| 27_K | 31_Q | 1.943 | 1.00 | |
| 85_I | 93_A | 1.936 | 1.00 | |
| 21_A | 74_I | 1.863 | 1.00 | |
| 21_A | 47_V | 1.859 | 1.00 | |
| 24_I | 51_L | 1.759 | 1.00 | |
| 78_E | 99_R | 1.696 | 1.00 | |
| 10_A | 46_L | 1.658 | 1.00 | |
| 12_S | 17_V | 1.644 | 1.00 | |
| 54_A | 107_V | 1.638 | 1.00 | |
| 68_D | 109_D | 1.601 | 1.00 | |
| 42_K | 46_L | 1.568 | 1.00 | |
| 86_M | 94_D | 1.522 | 1.00 | |
| 51_L | 71_V | 1.503 | 1.00 | |
| 88_R | 94_D | 1.498 | 1.00 | |
| 51_L | 105_V | 1.494 | 1.00 | |
| 85_I | 95_R | 1.407 | 0.99 | |
| 51_L | 55_I | 1.406 | 0.99 | |
| 81_S | 99_R | 1.404 | 0.99 | |
| 59_E | 66_I | 1.399 | 0.99 | |
| 61_N | 64_A | 1.39 | 0.99 | |
| 87_P | 94_D | 1.358 | 0.99 | |
| 87_P | 93_A | 1.358 | 0.99 | |
| 28_K | 31_Q | 1.338 | 0.99 | |
| 3_T | 62_D | 1.33 | 0.99 | |
| 77_D | 104_T | 1.328 | 0.99 | |
| 33_L | 48_K | 1.32 | 0.99 | |
| 75_F | 104_T | 1.276 | 0.99 | |
| 33_L | 55_I | 1.269 | 0.99 | |
| 50_V | 103_I | 1.259 | 0.99 | |
| 85_I | 94_D | 1.257 | 0.99 | |
| 81_S | 97_L | 1.243 | 0.98 | |
| 17_V | 103_I | 1.243 | 0.98 | |
| 12_S | 43_A | 1.236 | 0.98 | |
| 74_I | 105_V | 1.227 | 0.98 | |
| 79_G | 100_T | 1.21 | 0.98 | |
| 18_R | 77_D | 1.188 | 0.98 | |
| 47_V | 74_I | 1.184 | 0.98 | |
| 17_V | 47_V | 1.174 | 0.98 | |
| 50_V | 105_V | 1.161 | 0.97 | |
| 72_T | 106_V | 1.094 | 0.96 | |
| 19_L | 41_K | 1.087 | 0.96 | |
| 64_A | 109_D | 1.057 | 0.95 | |
| 20_V | 47_V | 1.053 | 0.95 | |
| 2_E | 108_S | 1.034 | 0.94 | |
| 65_D | 68_D | 1.024 | 0.93 | |
| 3_T | 107_V | 1.018 | 0.93 | |
| 23_L | 35_I | 1.016 | 0.93 | |
| 33_L | 37_T | 1.013 | 0.93 | |
| 23_L | 27_K | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kixS | 1 | 1 | 100 | 0.013 | Contact Map | 0.787 |
| 3j3wS | 1 | 1 | 100 | 0.019 | Contact Map | 0.778 |
| 3bboU | 1 | 1 | 100 | 0.032 | Contact Map | 0.514 |
| 2zjrP | 1 | 1 | 100 | 0.051 | Contact Map | 0.74 |
| 1i4jA | 2 | 0.9727 | 100 | 0.064 | Contact Map | 0.739 |
| 4a17Q | 1 | 0.9909 | 100 | 0.077 | Contact Map | 0.685 |
| 1vq8R | 1 | 0.9909 | 100 | 0.078 | Contact Map | 0.76 |
| 3zf7R | 1 | 0.9909 | 100 | 0.086 | Contact Map | 0.669 |
| 3j21S | 1 | 0.9909 | 100 | 0.087 | Contact Map | 0.677 |
| 2ftcM | 1 | 0.9636 | 100 | 0.089 | Contact Map | 0.053 |
Sequence Conservation (Image Generated using WebLogo v3)