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OPENSEQ.org

RDGB - RNPH
UniProt: P52061 - P0CG19
Length: 425
Sequences: 605
Seq/Len: 1.43
I_Prob: 0.00

RDGB - dITP/XTP pyrophosphatase
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RDGB
RNPH - Inactive ribonuclease PH
Paralog alert: 0.69 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: RNPH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
89_S 34_D 1.19 0.00
31_Q 185_T 1.05 0.00
5_V 185_T 1.03 0.00
20_L 160_A 1.01 0.00
187_L 204_A 0.94 0.00
43_G 183_A 0.92 0.00
79_G 42_S 0.92 0.00
72_L 45_E 0.89 0.00
43_G 137_L 0.87 0.00
42_T 183_A 0.86 0.00
5_V 24_A 0.85 0.00
8_T 42_S 0.85 0.00
98_N 187_M 0.85 0.00
8_T 150_L 0.83 0.00
162_V 20_Y 0.81 0.00
151_T 194_D 0.80 0.00
90_G 187_M 0.79 0.00
170_A 119_L 0.78 0.00
112_D 227_P 0.77 0.00
176_E 69_S 0.76 0.00
14_V 10_Q 0.76 0.00
170_A 53_G 0.75 0.00
6_L 194_D 0.74 0.00
46_F 132_G 0.74 0.00
173_T 145_V 0.74 0.00
180_I 146_E 0.73 0.00
89_S 94_I 0.73 0.00
189_L 223_G 0.73 0.00
39_A 134_C 0.72 0.00
117_R 74_N 0.72 0.00
61_T 182_A 0.72 0.00
39_A 72_T 0.71 0.00
52_L 183_A 0.71 0.00
179_A 50_F 0.71 0.00
101_K 225_S 0.69 0.00
14_V 151_K 0.69 0.00
105_T 91_Q 0.69 0.00
91_E 129_S 0.69 0.00
125_L 161_A 0.69 0.00
28_I 75_A 0.68 0.00
48_E 227_P 0.68 0.00
57_A 176_E 0.68 0.00
24_F 54_Q 0.68 0.00
76_V 144_L 0.68 0.00
48_E 204_A 0.68 0.00
100_Q 162_V 0.68 0.00
184_G 5_G 0.67 0.00
120_C 20_Y 0.67 0.00
124_Y 137_L 0.67 0.00
64_P 216_I 0.67 0.00
5_V 208_P 0.66 0.00
12_G 68_R 0.66 0.00
83_I 185_T 0.66 0.00
174_R 156_K 0.66 0.00
59_K 114_L 0.66 0.00
125_L 139_D 0.66 0.00
19_S 56_Q 0.65 0.00
120_C 197_I 0.64 0.00
137_H 152_T 0.64 0.00
8_T 14_V 0.64 0.00
189_L 10_Q 0.64 0.00
40_E 43_I 0.64 0.00
120_C 114_L 0.64 0.00
144_I 15_T 0.64 0.00
34_L 176_E 0.64 0.00
4_V 84_G 0.63 0.00
57_A 134_C 0.63 0.00
102_L 119_L 0.63 0.00
14_V 100_A 0.63 0.00
95_D 189_V 0.62 0.00
65_A 185_T 0.62 0.00
173_T 144_L 0.62 0.00
3_K 216_I 0.62 0.00
152_G 215_L 0.62 0.00
175_E 15_T 0.62 0.00
17_L 189_V 0.62 0.00
8_T 196_R 0.62 0.00
119_H 150_L 0.62 0.00
12_G 25_E 0.62 0.00
135_V 36_K 0.61 0.00
64_P 23_H 0.61 0.00
136_C 17_T 0.61 0.00
43_G 127_T 0.61 0.00
8_T 21_T 0.61 0.00
148_P 9_N 0.61 0.00
174_R 114_L 0.61 0.00
172_L 53_G 0.61 0.00
194_L 97_A 0.61 0.00
163_P 91_Q 0.61 0.00
147_E 189_V 0.61 0.00
83_I 208_P 0.61 0.00
167_K 53_G 0.61 0.00
105_T 110_F 0.61 0.00
31_Q 111_T 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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