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OPENSEQ.org

AGAA - AGAI
UniProt: P42906 - P42912
Length: 418
Sequences: 371
Seq/Len: 0.94
I_Prob: 0.07

AGAA - Putative N-acetylgalactosamine-6-phosphate deacetylase
Paralog alert: 0.28 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: AGAA
AGAI - Putative galactosamine-6-phosphate isomerase
Paralog alert: 0.34 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: AGAI NAGB YIEK
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
90_G 58_T 1.63 0.07
138_L 92_P 1.35 0.03
57_I 202_D 1.29 0.03
33_A 237_S 1.23 0.02
69_G 186_K 1.23 0.02
97_L 58_T 1.07 0.01
75_G 58_T 1.06 0.01
19_G 53_L 1.01 0.01
127_R 64_H 1.00 0.01
60_A 205_N 0.98 0.01
60_A 166_L 0.98 0.01
6_G 249_I 0.98 0.01
74_C 186_K 0.95 0.01
133_G 46_K 0.95 0.01
33_A 222_T 0.94 0.01
98_S 70_I 0.93 0.01
139_K 117_Q 0.93 0.01
102_A 58_T 0.93 0.01
138_L 33_E 0.92 0.01
11_H 61_L 0.91 0.01
102_A 148_V 0.90 0.01
105_N 117_Q 0.89 0.01
58_T 211_L 0.89 0.01
107_V 151_L 0.89 0.01
104_R 27_N 0.88 0.01
113_T 44_R 0.86 0.01
138_L 40_L 0.85 0.01
58_T 62_T 0.85 0.01
30_E 186_K 0.85 0.01
9_G 212_L 0.84 0.01
156_Q 68_E 0.84 0.01
19_G 84_K 0.84 0.01
105_N 222_T 0.83 0.01
40_P 203_I 0.82 0.01
112_V 43_I 0.82 0.01
58_T 246_I 0.82 0.01
130_G 244_N 0.82 0.01
99_V 193_T 0.82 0.01
86_R 85_L 0.81 0.01
102_A 212_L 0.81 0.01
12_H 52_C 0.81 0.01
66_M 186_K 0.81 0.01
138_L 224_R 0.80 0.01
104_R 237_S 0.80 0.01
82_G 129_T 0.79 0.01
130_G 189_G 0.79 0.01
13_R 215_G 0.78 0.01
113_T 33_E 0.78 0.01
65_G 212_L 0.78 0.01
66_M 238_F 0.76 0.00
75_G 108_V 0.76 0.00
98_S 75_V 0.76 0.00
6_G 77_V 0.76 0.00
111_G 247_C 0.76 0.00
103_V 144_L 0.76 0.00
17_M 198_L 0.75 0.00
160_I 241_L 0.75 0.00
4_Y 207_R 0.75 0.00
92_L 215_G 0.75 0.00
55_V 200_L 0.75 0.00
62_Q 166_L 0.75 0.00
60_A 34_R 0.75 0.00
19_G 98_T 0.75 0.00
122_S 58_T 0.75 0.00
83_G 180_Q 0.75 0.00
71_Y 197_T 0.74 0.00
17_M 209_V 0.74 0.00
80_M 58_T 0.74 0.00
141_G 197_T 0.74 0.00
160_I 225_F 0.74 0.00
90_G 182_H 0.73 0.00
12_H 125_E 0.73 0.00
97_L 212_L 0.73 0.00
4_Y 172_I 0.73 0.00
58_T 31_L 0.73 0.00
75_G 166_L 0.72 0.00
58_T 234_I 0.72 0.00
10_L 48_N 0.72 0.00
75_G 32_S 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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