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OPENSEQ.org

OBG - RL21
UniProt: P42641 - P0AG48
Length: 493
Sequences: 832
Seq/Len: 1.85
I_Prob: 0.01

OBG - GTPase ObgE/CgtA
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: OBG
RL21 - 50S ribosomal protein L21
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL21
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
148_D 4_V 1.20 0.01
222_A 75_V 1.11 0.01
123_H 75_V 1.10 0.01
118_A 87_Q 1.05 0.01
276_K 4_V 1.02 0.01
61_F 66_H 0.98 0.01
223_E 61_A 0.96 0.01
276_K 15_S 0.94 0.01
38_D 25_L 0.93 0.01
83_G 33_V 0.92 0.01
52_N 78_R 0.91 0.01
282_F 6_Q 0.91 0.01
245_I 18_Q 0.88 0.01
207_K 68_R 0.88 0.01
35_D 35_F 0.85 0.01
280_L 102_S 0.84 0.01
163_G 10_K 0.84 0.00
194_L 64_V 0.81 0.00
180_S 17_G 0.80 0.00
45_V 58_V 0.80 0.00
235_L 76_K 0.80 0.00
152_L 96_V 0.79 0.00
131_K 63_V 0.79 0.00
24_R 98_I 0.79 0.00
313_I 85_K 0.77 0.00
222_A 82_H 0.77 0.00
183_K 97_K 0.77 0.00
58_D 30_G 0.76 0.00
319_L 13_R 0.76 0.00
15_D 94_T 0.76 0.00
142_T 79_R 0.75 0.00
142_T 80_R 0.74 0.00
105_M 6_Q 0.74 0.00
321_V 33_V 0.74 0.00
13_A 23_E 0.74 0.00
316_A 32_T 0.73 0.00
12_V 22_L 0.72 0.00
54_N 79_R 0.72 0.00
58_D 7_S 0.72 0.00
7_A 73_K 0.72 0.00
267_E 27_I 0.72 0.00
236_E 96_V 0.72 0.00
82_R 68_R 0.71 0.00
130_F 52_P 0.71 0.00
239_R 67_G 0.71 0.00
272_D 12_H 0.71 0.00
261_I 53_F 0.71 0.00
10_L 20_V 0.70 0.00
6_E 68_R 0.70 0.00
11_V 20_V 0.70 0.00
306_W 20_V 0.70 0.00
272_D 84_R 0.69 0.00
283_N 69_G 0.69 0.00
61_F 23_E 0.69 0.00
245_I 13_R 0.69 0.00
82_R 63_V 0.69 0.00
7_A 97_K 0.68 0.00
131_K 82_H 0.67 0.00
38_D 70_E 0.67 0.00
7_A 19_T 0.67 0.00
169_N 12_H 0.67 0.00
204_D 45_E 0.67 0.00
163_G 12_H 0.67 0.00
242_L 26_D 0.67 0.00
59_Y 10_K 0.66 0.00
262_I 12_H 0.66 0.00
31_K 41_I 0.66 0.00
25_R 9_G 0.66 0.00
319_L 102_S 0.66 0.00
6_E 80_R 0.66 0.00
68_E 96_V 0.66 0.00
113_Q 5_F 0.65 0.00
28_Y 85_K 0.65 0.00
4_V 85_K 0.65 0.00
7_A 40_M 0.65 0.00
319_L 45_E 0.65 0.00
197_S 80_R 0.65 0.00
133_S 69_G 0.65 0.00
181_A 100_G 0.65 0.00
283_N 24_K 0.65 0.00
49_A 23_E 0.64 0.00
9_I 62_E 0.64 0.00
321_V 31_E 0.64 0.00
88_I 92_W 0.64 0.00
100_G 72_V 0.64 0.00
258_N 18_Q 0.64 0.00
332_I 31_E 0.64 0.00
134_V 98_I 0.64 0.00
170_A 95_D 0.64 0.00
135_N 79_R 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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