| UniProt: | P0AG48 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG50001 | ||
| Length: | 103 (103) | ||
| Sequences: | 1409 | ||
| Seq/Len: | 13.68 |
| RL21
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 62_E | 99_T | 3.737 | 1.00 | |
| 28_A | 31_E | 3.575 | 1.00 | |
| 16_E | 100_G | 3.448 | 1.00 | |
| 6_Q | 37_E | 3.354 | 1.00 | |
| 68_R | 92_W | 3.27 | 1.00 | |
| 27_I | 63_V | 3.218 | 1.00 | |
| 73_K | 86_Q | 2.797 | 1.00 | |
| 15_S | 18_Q | 2.597 | 1.00 | |
| 34_E | 58_V | 2.552 | 1.00 | |
| 61_A | 98_I | 2.458 | 1.00 | |
| 62_E | 97_K | 2.414 | 1.00 | |
| 21_R | 95_D | 2.274 | 1.00 | |
| 32_T | 60_K | 2.079 | 1.00 | |
| 78_R | 83_Y | 2.031 | 1.00 | |
| 22_L | 96_V | 2.005 | 1.00 | |
| 35_F | 96_V | 1.94 | 1.00 | |
| 40_M | 47_V | 1.884 | 1.00 | |
| 19_T | 95_D | 1.871 | 1.00 | |
| 58_V | 102_S | 1.828 | 1.00 | |
| 7_S | 22_L | 1.815 | 1.00 | |
| 10_K | 23_E | 1.809 | 1.00 | |
| 77_F | 80_R | 1.794 | 1.00 | |
| 61_A | 96_V | 1.723 | 1.00 | |
| 65_A | 95_D | 1.538 | 1.00 | |
| 6_Q | 53_F | 1.533 | 1.00 | |
| 34_E | 60_K | 1.5 | 1.00 | |
| 5_F | 35_F | 1.449 | 1.00 | |
| 7_S | 23_E | 1.405 | 0.99 | |
| 40_M | 49_I | 1.394 | 0.99 | |
| 67_G | 93_F | 1.352 | 0.99 | |
| 21_R | 69_G | 1.319 | 0.99 | |
| 64_V | 97_K | 1.314 | 0.99 | |
| 19_T | 97_K | 1.304 | 0.99 | |
| 74_I | 87_Q | 1.291 | 0.99 | |
| 76_K | 83_Y | 1.256 | 0.99 | |
| 74_I | 83_Y | 1.235 | 0.98 | |
| 49_I | 52_P | 1.232 | 0.98 | |
| 75_V | 86_Q | 1.231 | 0.98 | |
| 27_I | 31_E | 1.228 | 0.98 | |
| 43_N | 46_E | 1.209 | 0.98 | |
| 35_F | 61_A | 1.191 | 0.98 | |
| 52_P | 56_G | 1.178 | 0.98 | |
| 60_K | 100_G | 1.175 | 0.98 | |
| 32_T | 99_T | 1.175 | 0.98 | |
| 54_V | 57_G | 1.162 | 0.97 | |
| 20_V | 96_V | 1.154 | 0.97 | |
| 75_V | 84_R | 1.141 | 0.97 | |
| 7_S | 12_H | 1.123 | 0.97 | |
| 37_E | 53_F | 1.048 | 0.94 | |
| 29_T | 65_A | 1.024 | 0.93 | |
| 5_F | 59_I | 1.008 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3bboT | 1 | 1 | 100 | 0.02 | Contact Map | 0.608 |
| 4kixR | 1 | 1 | 100 | 0.036 | Contact Map | 0.773 |
| 3j3wR | 1 | 0.9903 | 100 | 0.049 | Contact Map | 0.797 |
| 3v2dV | 1 | 0.9806 | 100 | 0.056 | Contact Map | 0.792 |
| 2zjrO | 1 | 0.9709 | 100 | 0.082 | Contact Map | 0.305 |
| 2xhaA | 2 | 0.8155 | 68.5 | 0.888 | Contact Map | 0.036 |
| 2y4xA | 2 | 0.5437 | 23.5 | 0.916 | Contact Map | 0.354 |
| 4av2M | 12 | 0.6796 | 12.9 | 0.925 | Contact Map | 0.433 |
| 2ivwA | 1 | 0.6796 | 11.6 | 0.927 | Contact Map | 0.43 |
| 3ossC | 1 | 0.4563 | 10.8 | 0.928 | Contact Map | 0.384 |
Sequence Conservation (Image Generated using WebLogo v3)