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OPENSEQ.org

GSPH - GSPI
UniProt: P41443 - P45760
Length: 294
Sequences: 187
Seq/Len: 0.67
I_Prob: 0.01

GSPH - Putative type II secretion system protein H
Paralog alert: 0.20 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: GSPH
GSPI - Putative type II secretion system protein I
Paralog alert: 0.18 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: GSPI
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
49_A 75_G 1.61 0.01
14_L 94_E 1.43 0.01
14_L 7_M 1.36 0.00
130_G 78_W 1.35 0.00
129_D 78_W 1.34 0.00
131_Q 78_W 1.34 0.00
54_A 25_T 1.33 0.00
158_P 43_E 1.30 0.00
27_L 21_A 1.30 0.00
28_F 21_A 1.30 0.00
23_A 19_F 1.29 0.00
126_I 96_T 1.28 0.00
19_V 7_M 1.25 0.00
52_E 17_S 1.25 0.00
57_R 28_S 1.25 0.00
137_L 27_M 1.24 0.00
47_F 70_K 1.23 0.00
123_Q 69_G 1.23 0.00
88_W 48_W 1.23 0.00
58_A 18_I 1.22 0.00
2_N 116_D 1.21 0.00
68_H 116_D 1.21 0.00
90_P 83_D 1.20 0.00
134_P 92_L 1.18 0.00
102_D 97_I 1.18 0.00
46_R 95_R 1.18 0.00
17_A 40_M 1.17 0.00
24_S 111_R 1.17 0.00
101_N 27_M 1.17 0.00
142_A 18_I 1.17 0.00
55_I 18_I 1.17 0.00
57_R 40_M 1.17 0.00
28_F 5_S 1.16 0.00
151_L 103_S 1.16 0.00
43_T 81_R 1.16 0.00
66_G 78_W 1.16 0.00
134_P 91_T 1.15 0.00
123_Q 10_L 1.14 0.00
124_V 65_T 1.14 0.00
8_T 19_F 1.14 0.00
87_R 28_S 1.14 0.00
13_M 53_Q 1.13 0.00
10_L 111_R 1.12 0.00
155_G 51_D 1.09 0.00
17_A 91_T 1.08 0.00
76_I 45_L 1.07 0.00
150_T 109_L 1.06 0.00
51_L 96_T 1.06 0.00
14_L 84_I 1.06 0.00
46_R 34_R 1.05 0.00
139_M 109_L 1.05 0.00
105_E 68_S 1.05 0.00
56_D 48_W 1.04 0.00
73_A 90_G 1.04 0.00
117_D 7_M 1.03 0.00
67_I 78_W 1.03 0.00
122_P 78_W 1.03 0.00
49_A 13_L 1.02 0.00
91_L 87_S 1.02 0.00
50_A 13_L 1.02 0.00
56_D 10_L 1.01 0.00
75_R 48_W 1.01 0.00
56_D 37_I 1.00 0.00
5_R 2_N 1.00 0.00
14_L 74_N 1.00 0.00
57_R 13_L 1.00 0.00
3_Q 70_K 0.99 0.00
104_D 73_I 0.99 0.00
81_K 97_I 0.98 0.00
103_W 92_L 0.98 0.00
43_T 37_I 0.97 0.00
126_I 26_L 0.97 0.00
76_I 22_V 0.96 0.00
124_V 20_T 0.96 0.00
70_S 67_S 0.96 0.00
115_K 60_F 0.96 0.00
154_S 93_L 0.96 0.00
21_I 64_N 0.95 0.00
73_A 74_N 0.95 0.00
12_M 34_R 0.95 0.00
90_P 55_Q 0.95 0.00
109_I 55_Q 0.95 0.00
151_L 85_H 0.95 0.00
103_W 73_I 0.95 0.00
109_I 100_T 0.94 0.00
35_V 7_M 0.94 0.00
63_Q 7_M 0.94 0.00
151_L 3_K 0.94 0.00
47_F 105_Q 0.94 0.00
39_R 61_G 0.94 0.00
130_G 80_W 0.94 0.00
20_A 43_E 0.94 0.00
43_T 25_T 0.94 0.00
32_R 26_L 0.94 0.00
66_G 49_I 0.93 0.00
18_L 41_R 0.93 0.00
101_N 41_R 0.93 0.00
10_L 55_Q 0.93 0.00
111_L 87_S 0.93 0.00
75_R 97_I 0.93 0.00
31_G 19_F 0.92 0.00
131_Q 10_L 0.92 0.00
15_V 13_L 0.92 0.00
137_L 21_A 0.92 0.00
72_S 10_L 0.92 0.00
111_L 105_Q 0.91 0.00
151_L 22_V 0.91 0.00
19_V 38_E 0.91 0.00
129_D 95_R 0.91 0.00
16_L 36_A 0.91 0.00
29_T 21_A 0.90 0.00
150_T 42_N 0.90 0.00
33_E 109_L 0.90 0.00
90_P 81_R 0.89 0.00
12_M 47_L 0.89 0.00
49_A 81_R 0.89 0.00
99_S 51_D 0.89 0.00
51_L 39_R 0.89 0.00
132_I 18_I 0.89 0.00
153_C 48_W 0.88 0.00
67_I 25_T 0.88 0.00
12_M 108_S 0.88 0.00
126_I 30_M 0.88 0.00
50_A 36_A 0.88 0.00
34_D 59_S 0.88 0.00
66_G 43_E 0.88 0.00
160_D 12_V 0.88 0.00
128_A 52_N 0.88 0.00
19_V 55_Q 0.87 0.00
13_M 64_N 0.87 0.00
67_I 7_M 0.87 0.00
33_E 51_D 0.87 0.00
21_I 24_L 0.87 0.00
25_V 107_T 0.87 0.00
57_R 65_T 0.87 0.00
125_V 10_L 0.87 0.00
133_T 51_D 0.87 0.00
143_G 83_D 0.86 0.00
53_L 33_Q 0.86 0.00
52_E 13_L 0.86 0.00
59_T 23_A 0.86 0.00
87_R 102_P 0.86 0.00
13_M 116_D 0.86 0.00
130_G 33_Q 0.86 0.00
20_A 28_S 0.85 0.00
159_L 33_Q 0.85 0.00
14_L 10_L 0.85 0.00
149_L 20_T 0.85 0.00
70_S 83_D 0.85 0.00
56_D 36_A 0.85 0.00
37_S 4_Q 0.85 0.00
99_S 29_S 0.85 0.00
15_V 99_V 0.85 0.00
64_P 78_W 0.85 0.00
156_S 22_V 0.85 0.00
62_G 96_T 0.85 0.00
159_L 26_L 0.84 0.00
60_L 13_L 0.84 0.00
98_E 7_M 0.84 0.00
29_T 32_G 0.84 0.00
41_R 57_Q 0.84 0.00
16_L 109_L 0.84 0.00
130_G 49_I 0.84 0.00
67_I 10_L 0.84 0.00
72_S 18_I 0.83 0.00
22_T 74_N 0.83 0.00
133_T 32_G 0.83 0.00
124_V 45_L 0.83 0.00
128_A 39_R 0.83 0.00
13_M 70_K 0.83 0.00
124_V 50_A 0.83 0.00
108_S 102_P 0.83 0.00
162_T 12_V 0.83 0.00
23_A 18_I 0.83 0.00
66_G 69_G 0.82 0.00
25_V 36_A 0.82 0.00
37_S 59_S 0.82 0.00
1_M 109_L 0.82 0.00
124_V 41_R 0.82 0.00
101_N 34_R 0.82 0.00
49_A 48_W 0.82 0.00
78_V 7_M 0.82 0.00
35_V 109_L 0.82 0.00
126_I 104_G 0.82 0.00
47_F 104_G 0.82 0.00
46_R 114_S 0.81 0.00
5_R 53_Q 0.81 0.00
92_Q 87_S 0.81 0.00
30_Y 31_Q 0.81 0.00
8_T 61_G 0.81 0.00
97_D 65_T 0.81 0.00
61_S 87_S 0.81 0.00
126_I 20_T 0.81 0.00
142_A 47_L 0.81 0.00
110_H 109_L 0.81 0.00
41_R 106_T 0.81 0.00
105_E 72_L 0.81 0.00
23_A 56_S 0.81 0.00
17_A 96_T 0.81 0.00
25_V 48_W 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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