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OPENSEQ.org

HYBD - HYBG
UniProt: P37182 - P0AAM7
Length: 246
Sequences: 340
Seq/Len: 1.45
I_Prob: 0.04

HYBD - Hydrogenase 2 maturation protease
Paralog alert: 0.59 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: HYAD HYBD HYCI
HYBG - Hydrogenase-2 operon protein HybG
Paralog alert: 0.48 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: HYBG HYPC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
121_P 27_I 1.39 0.04
39_L 9_V 1.20 0.02
134_V 5_V 1.14 0.02
33_P 62_E 1.13 0.02
135_E 49_V 1.12 0.02
91_S 32_N 1.11 0.02
116_L 70_D 1.10 0.02
60_I 3_I 1.08 0.02
18_I 9_V 1.04 0.01
59_I 60_I 1.02 0.01
39_L 74_Q 1.01 0.01
81_E 63_D 0.98 0.01
8_V 38_E 0.97 0.01
113_K 62_E 0.96 0.01
103_A 58_S 0.94 0.01
99_D 22_V 0.93 0.01
66_S 4_G 0.92 0.01
120_I 9_V 0.88 0.01
5_V 67_A 0.87 0.01
124_L 11_A 0.87 0.01
74_M 70_D 0.86 0.01
76_I 53_V 0.85 0.01
129_G 10_L 0.85 0.01
39_L 36_I 0.85 0.01
159_R 62_E 0.84 0.01
135_E 67_A 0.84 0.01
45_G 61_D 0.84 0.01
132_P 38_E 0.84 0.01
63_A 7_G 0.84 0.01
74_M 76_D 0.83 0.01
26_L 11_A 0.83 0.01
74_M 9_V 0.82 0.01
52_M 7_G 0.82 0.01
40_D 68_T 0.82 0.01
132_P 63_D 0.82 0.01
82_V 5_V 0.82 0.01
32_L 9_V 0.82 0.01
113_K 60_I 0.81 0.01
94_Q 57_M 0.81 0.01
52_M 13_G 0.80 0.01
35_Y 5_V 0.80 0.01
101_L 53_V 0.80 0.01
34_D 59_I 0.80 0.01
6_L 32_N 0.79 0.01
72_G 55_F 0.79 0.01
124_L 25_C 0.79 0.01
81_E 67_A 0.79 0.01
158_P 59_I 0.79 0.01
121_P 51_V 0.79 0.01
135_E 63_D 0.79 0.01
24_E 64_E 0.79 0.01
103_A 33_I 0.79 0.01
148_A 31_V 0.79 0.01
134_V 64_E 0.78 0.01
36_V 74_Q 0.77 0.01
95_L 72_L 0.77 0.01
152_S 38_E 0.76 0.01
140_P 45_L 0.76 0.01
20_V 36_I 0.76 0.01
108_G 49_V 0.76 0.01
94_Q 72_L 0.76 0.01
95_L 64_E 0.76 0.01
130_L 21_Q 0.76 0.01
82_V 53_V 0.75 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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