| UniProt: | P0AAM3 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10485 | ||
| Length: | 90 (82) | ||
| Sequences: | 641 | ||
| Seq/Len: | 7.82 |
| HYPC
Paralog alert: 0.49 [within 20: 0.02] - ratio of genomes with paralogs Cluster includes: HYBG HYPC |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 9_I | 42_P | 2.78 | 1.00 | |
| 61_E | 65_R | 2.692 | 1.00 | |
| 7_G | 21_V | 2.403 | 1.00 | |
| 66_D | 69_D | 2.26 | 1.00 | |
| 18_K | 25_Q | 2.106 | 1.00 | |
| 62_A | 66_D | 2.078 | 1.00 | |
| 17_A | 30_L | 1.951 | 1.00 | |
| 65_R | 69_D | 1.854 | 1.00 | |
| 67_T | 71_L | 1.722 | 1.00 | |
| 10_R | 25_Q | 1.62 | 1.00 | |
| 46_Q | 58_V | 1.589 | 1.00 | |
| 29_D | 32_L | 1.558 | 1.00 | |
| 11_T | 18_K | 1.556 | 1.00 | |
| 64_A | 68_L | 1.513 | 1.00 | |
| 8_Q | 20_D | 1.426 | 0.99 | |
| 63_E | 66_D | 1.381 | 0.99 | |
| 52_V | 55_A | 1.358 | 0.99 | |
| 28_V | 55_A | 1.354 | 0.99 | |
| 20_D | 23_G | 1.334 | 0.99 | |
| 49_L | 60_N | 1.326 | 0.98 | |
| 24_I | 52_V | 1.307 | 0.98 | |
| 7_G | 50_V | 1.295 | 0.98 | |
| 8_Q | 61_E | 1.276 | 0.98 | |
| 8_Q | 47_W | 1.264 | 0.98 | |
| 33_V | 58_V | 1.229 | 0.97 | |
| 29_D | 54_F | 1.225 | 0.97 | |
| 26_R | 71_L | 1.188 | 0.96 | |
| 49_L | 59_I | 1.187 | 0.96 | |
| 22_C | 72_Q | 1.177 | 0.96 | |
| 70_A | 73_N | 1.142 | 0.95 | |
| 36_C | 39_N | 1.127 | 0.95 | |
| 81_V | 84_L | 1.103 | 0.94 | |
| 9_I | 17_A | 1.096 | 0.94 | |
| 7_G | 29_D | 1.093 | 0.93 | |
| 12_I | 44_V | 1.078 | 0.93 | |
| 7_G | 20_D | 1.075 | 0.93 | |
| 7_G | 32_L | 1.072 | 0.93 | |
| 80_D | 83_A | 1.066 | 0.92 | |
| 21_V | 26_R | 1.059 | 0.92 | |
| 18_K | 27_D | 1.059 | 0.92 | |
| 7_G | 19_V | 1.02 | 0.90 | |
| 52_V | 57_S | 1.013 | 0.89 | |
| 26_R | 56_M | 1.001 | 0.89 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2ot2A | 1 | 1 | 100 | 0.091 | Contact Map | 0.552 |
| 3d3rA | 2 | 0.8778 | 99.9 | 0.143 | Contact Map | 0.643 |
| 2z1cA | 3 | 0.8333 | 99.9 | 0.144 | Contact Map | 0.66 |
| 4in3A | 2 | 0.7889 | 30.2 | 0.893 | Contact Map | 0.632 |
| 3m9bA | 12 | 0.8556 | 21.3 | 0.9 | Contact Map | 0.405 |
| 2rcnA | 1 | 0.9333 | 18.2 | 0.903 | Contact Map | 0.709 |
| 2pb9A | 2 | 0.9889 | 12.3 | 0.911 | Contact Map | 0.085 |
| 2eqjA | 1 | 0.4222 | 8.2 | 0.918 | Contact Map | 0.571 |
| 2ztdA | 2 | 0.9333 | 5.8 | 0.923 | Contact Map | 0.559 |
| 4n6aA | 2 | 0.4444 | 5.6 | 0.924 | Contact Map |
Sequence Conservation (Image Generated using WebLogo v3)