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OPENSEQ.org

NNR - YJEE
UniProt: P31806 - P0AF67
Length: 668
Sequences: 406
Seq/Len: 0.64
I_Prob: 0.00

NNR - Bifunctional NAD(P)H-hydrate repair enzyme Nnr
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: NNR
YJEE - UPF0079 ATP-binding protein YjeE
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YJEE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
259_I 102_D 1.44 0.00
66_L 22_A 1.25 0.00
24_R 51_A 1.22 0.00
371_V 16_D 1.21 0.00
191_I 102_D 1.20 0.00
20_A 58_V 1.19 0.00
137_L 65_L 1.15 0.00
379_A 43_T 1.13 0.00
435_M 102_D 1.12 0.00
67_C 141_S 1.11 0.00
241_W 9_P 1.11 0.00
132_L 137_V 1.06 0.00
434_G 63_Y 1.06 0.00
34_L 107_V 1.06 0.00
203_G 65_L 1.05 0.00
177_T 12_Q 1.05 0.00
490_L 85_A 1.05 0.00
379_A 113_G 1.03 0.00
325_V 43_T 1.02 0.00
143_R 138_S 1.02 0.00
383_L 43_T 1.01 0.00
356_A 88_E 1.01 0.00
245_R 94_G 1.00 0.00
205_A 51_A 0.99 0.00
356_A 17_L 0.99 0.00
79_V 104_I 0.98 0.00
113_L 99_F 0.97 0.00
376_P 118_P 0.95 0.00
66_L 84_L 0.95 0.00
418_V 57_N 0.94 0.00
132_L 127_D 0.94 0.00
486_L 81_L 0.94 0.00
202_T 59_K 0.93 0.00
14_P 44_F 0.93 0.00
257_L 44_F 0.93 0.00
278_L 31_I 0.92 0.00
360_L 22_A 0.91 0.00
20_A 44_F 0.91 0.00
103_E 124_I 0.91 0.00
333_Q 21_V 0.91 0.00
434_G 94_G 0.90 0.00
265_G 118_P 0.89 0.00
188_D 130_A 0.89 0.00
281_G 139_A 0.89 0.00
252_G 69_Y 0.89 0.00
394_R 46_R 0.89 0.00
90_V 46_R 0.88 0.00
494_L 13_A 0.88 0.00
220_D 45_S 0.87 0.00
406_G 16_D 0.86 0.00
27_E 128_Y 0.86 0.00
417_V 101_N 0.86 0.00
119_I 119_D 0.86 0.00
390_I 143_A 0.86 0.00
117_G 107_V 0.86 0.00
465_G 15_L 0.85 0.00
31_A 36_D 0.85 0.00
384_G 75_M 0.85 0.00
304_L 58_V 0.85 0.00
393_D 121_D 0.85 0.00
167_V 126_I 0.85 0.00
371_V 103_A 0.84 0.00
490_L 50_Q 0.84 0.00
27_E 44_F 0.84 0.00
356_A 99_F 0.84 0.00
403_Q 135_A 0.84 0.00
379_A 121_D 0.84 0.00
146_P 51_A 0.84 0.00
427_I 106_L 0.84 0.00
153_L 72_D 0.84 0.00
276_A 90_L 0.84 0.00
137_L 51_A 0.84 0.00
163_P 90_L 0.84 0.00
197_K 42_T 0.83 0.00
272_M 64_T 0.83 0.00
240_H 145_E 0.83 0.00
241_W 135_A 0.83 0.00
26_G 49_L 0.83 0.00
284_L 14_T 0.83 0.00
395_L 95_I 0.83 0.00
51_Q 44_F 0.83 0.00
22_D 11_E 0.83 0.00
212_L 125_H 0.83 0.00
199_G 33_L 0.82 0.00
305_M 81_L 0.82 0.00
473_A 116_V 0.82 0.00
443_V 18_G 0.82 0.00
114_N 142_S 0.82 0.00
205_A 102_D 0.82 0.00
338_K 131_Q 0.82 0.00
421_H 54_H 0.82 0.00
106_A 149_A 0.82 0.00
415_G 121_D 0.82 0.00
468_A 126_I 0.82 0.00
144_Q 74_L 0.82 0.00
484_G 81_L 0.82 0.00
80_A 81_L 0.81 0.00
113_L 106_L 0.81 0.00
335_W 59_K 0.81 0.00
393_D 65_L 0.81 0.00
97_S 21_V 0.81 0.00
165_V 142_S 0.81 0.00
166_A 25_C 0.81 0.00
61_R 8_L 0.81 0.00
209_T 102_D 0.80 0.00
54_R 16_D 0.80 0.00
483_R 86_D 0.80 0.00
367_R 51_A 0.80 0.00
351_L 75_M 0.80 0.00
243_K 28_A 0.80 0.00
356_A 97_D 0.80 0.00
466_C 112_Q 0.80 0.00
96_E 44_F 0.79 0.00
479_R 9_P 0.79 0.00
272_M 136_R 0.79 0.00
417_V 44_F 0.79 0.00
50_F 59_K 0.79 0.00
355_D 90_L 0.79 0.00
242_L 13_A 0.79 0.00
494_L 140_V 0.79 0.00
335_W 88_E 0.79 0.00
165_V 137_V 0.79 0.00
431_G 62_T 0.79 0.00
335_W 67_E 0.79 0.00
438_G 14_T 0.79 0.00
384_G 11_E 0.79 0.00
320_W 93_M 0.78 0.00
418_V 74_L 0.78 0.00
104_E 28_A 0.78 0.00
203_G 51_A 0.78 0.00
274_G 16_D 0.78 0.00
393_D 113_G 0.78 0.00
473_A 119_D 0.78 0.00
108_A 67_E 0.78 0.00
487_A 87_P 0.78 0.00
13_I 124_I 0.78 0.00
134_V 65_L 0.78 0.00
202_T 120_P 0.78 0.00
391_E 43_T 0.78 0.00
126_W 23_K 0.78 0.00
476_L 17_L 0.77 0.00
462_A 137_V 0.77 0.00
205_A 23_K 0.77 0.00
120_H 137_V 0.77 0.00
35_G 112_Q 0.77 0.00
430_A 45_S 0.77 0.00
440_M 63_Y 0.77 0.00
496_R 9_P 0.77 0.00
296_P 44_F 0.76 0.00
212_L 126_I 0.76 0.00
292_E 150_R 0.76 0.00
381_R 58_V 0.76 0.00
181_P 51_A 0.76 0.00
335_W 113_G 0.76 0.00
257_L 49_L 0.76 0.00
161_P 20_R 0.76 0.00
371_V 146_L 0.76 0.00
224_A 124_I 0.76 0.00
273_T 120_P 0.76 0.00
20_A 59_K 0.76 0.00
343_V 43_T 0.76 0.00
29_E 6_I 0.75 0.00
383_L 46_R 0.75 0.00
469_H 33_L 0.75 0.00
486_L 63_Y 0.75 0.00
53_C 136_R 0.75 0.00
208_V 136_R 0.75 0.00
133_I 26_D 0.75 0.00
465_G 7_P 0.75 0.00
447_I 141_S 0.75 0.00
301_R 58_V 0.75 0.00
313_S 103_A 0.75 0.00
389_E 17_L 0.75 0.00
443_V 22_A 0.75 0.00
279_R 120_P 0.74 0.00
338_K 51_A 0.74 0.00
52_V 138_S 0.74 0.00
280_A 131_Q 0.74 0.00
182_G 32_Y 0.74 0.00
32_D 26_D 0.74 0.00
20_A 64_T 0.74 0.00
289_T 69_Y 0.74 0.00
384_G 12_Q 0.74 0.00
422_P 72_D 0.74 0.00
336_G 56_G 0.74 0.00
428_I 14_T 0.74 0.00
272_M 151_L 0.74 0.00
252_G 110_P 0.74 0.00
114_N 127_D 0.74 0.00
192_T 42_T 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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