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OPENSEQ.org

RFH - YCIO
UniProt: P28369 - P0AFR4
Length: 372
Sequences: 502
Seq/Len: 1.39
I_Prob: 0.00

RFH - Putative peptide chain release factor homolog
Paralog alert: 0.91 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RFH
YCIO - Uncharacterized protein YciO
Paralog alert: 0.53 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RIMN YCIO
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
33_C 107_V 1.15 0.00
116_K 127_P 1.09 0.00
91_S 93_T 1.09 0.00
50_R 75_L 1.06 0.00
78_S 107_V 1.03 0.00
1_M 73_S 1.02 0.00
51_K 58_Q 1.02 0.00
67_Q 205_F 0.99 0.00
72_R 32_Y 0.98 0.00
35_T 78_Y 0.97 0.00
18_V 53_I 0.96 0.00
20_L 162_D 0.96 0.00
66_E 25_R 0.95 0.00
116_K 90_K 0.94 0.00
134_N 19_Q 0.94 0.00
117_R 187_L 0.93 0.00
106_V 103_G 0.92 0.00
75_T 187_L 0.92 0.00
13_L 132_L 0.91 0.00
117_R 205_F 0.91 0.00
68_S 186_D 0.90 0.00
86_V 194_V 0.88 0.00
110_R 142_S 0.87 0.00
120_R 164_L 0.87 0.00
126_K 104_T 0.86 0.00
125_W 164_L 0.86 0.00
22_G 96_N 0.86 0.00
121_L 44_I 0.84 0.00
8_R 156_D 0.84 0.00
86_V 123_V 0.83 0.00
132_Q 185_I 0.83 0.00
141_Q 118_T 0.83 0.00
141_Q 18_N 0.82 0.00
98_L 134_E 0.82 0.00
124_A 114_E 0.82 0.00
141_Q 102_K 0.82 0.00
116_K 121_M 0.81 0.00
20_L 176_Y 0.80 0.00
110_R 187_L 0.80 0.00
125_W 132_L 0.80 0.00
102_I 55_R 0.79 0.00
23_D 72_L 0.79 0.00
104_V 138_E 0.78 0.00
71_I 121_M 0.78 0.00
131_Q 204_P 0.78 0.00
33_C 45_E 0.78 0.00
138_L 159_E 0.77 0.00
22_G 8_H 0.77 0.00
65_Q 18_N 0.77 0.00
100_S 118_T 0.76 0.00
50_R 3_Q 0.75 0.00
41_P 100_I 0.75 0.00
117_R 123_V 0.74 0.00
78_S 45_E 0.74 0.00
18_V 108_P 0.74 0.00
21_D 125_S 0.73 0.00
124_A 175_G 0.73 0.00
31_S 28_G 0.73 0.00
16_A 76_S 0.73 0.00
16_A 204_P 0.73 0.00
139_K 171_I 0.73 0.00
56_G 35_D 0.72 0.00
8_R 102_K 0.72 0.00
46_P 130_Q 0.72 0.00
4_T 18_N 0.72 0.00
71_I 203_K 0.72 0.00
55_L 92_N 0.72 0.00
116_K 120_G 0.71 0.00
106_V 126_N 0.71 0.00
41_P 75_L 0.71 0.00
15_S 35_D 0.71 0.00
133_E 158_E 0.71 0.00
60_F 53_I 0.71 0.00
148_Q 23_I 0.70 0.00
136_A 193_V 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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