May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

WECB - WECC
UniProt: P27828 - P27829
Length: 796
Sequences: 539
Seq/Len: 0.69
I_Prob: 0.00

WECB - UDP-N-acetylglucosamine 2-epimerase
Paralog alert: 0.25 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: WECB
WECC - UDP-N-acetyl-D-mannosamine dehydrogenase
Paralog alert: 0.62 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: UDG WECC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
158_R 68_R 1.24 0.00
330_Q 177_I 1.23 0.00
182_D 99_E 1.12 0.00
23_L 260_P 1.01 0.00
22_A 239_N 1.00 0.00
88_D 77_D 0.96 0.00
203_P 323_I 0.93 0.00
66_G 237_G 0.91 0.00
80_P 392_M 0.89 0.00
106_A 154_I 0.86 0.00
59_N 351_Q 0.84 0.00
366_L 355_G 0.83 0.00
242_V 345_I 0.83 0.00
265_V 141_T 0.82 0.00
103_S 71_T 0.82 0.00
206_K 323_I 0.82 0.00
152_S 39_V 0.81 0.00
60_I 237_G 0.81 0.00
316_A 243_L 0.80 0.00
208_I 245_R 0.80 0.00
177_L 39_V 0.80 0.00
53_V 412_V 0.80 0.00
198_Y 277_Q 0.79 0.00
28_F 68_R 0.79 0.00
263_K 71_T 0.79 0.00
77_G 40_D 0.78 0.00
3_V 410_Q 0.78 0.00
144_Y 346_A 0.78 0.00
283_A 342_A 0.77 0.00
81_I 36_Q 0.77 0.00
362_C 56_S 0.77 0.00
330_Q 72_T 0.77 0.00
358_D 34_I 0.77 0.00
225_I 238_I 0.77 0.00
111_I 333_N 0.77 0.00
48_K 141_T 0.77 0.00
239_I 96_T 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0396 seconds.