May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PSPE - YGAV
UniProt: P23857 - P77295
Length: 203
Sequences: 367
Seq/Len: 2.02
I_Prob: 0.05
PSPE - Thiosulfate sulfurtransferase PspE
Paralog alert: 0.66 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: GLPE PSPE YIBN 		YGAV - Probable HTH-type transcriptional regulator YgaV
Paralog alert: 0.75 [within 20: 0.14] - ratio of genomes with paralogs
Cluster includes: ARSR YGAV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
96_D 22_S 1.27 0.05
41_I 84_E 1.04 0.03
36_H 86_V 1.01 0.02
70_G 31_C 0.89 0.02
60_N 89_I 0.87 0.01
32_Y 68_I 0.84 0.01
47_E 58_H 0.81 0.01
24_I 46_R 0.81 0.01
98_A 73_D 0.80 0.01
20_A 64_D 0.79 0.01
64_K 31_C 0.78 0.01
71_R 40_S 0.78 0.01
69_A 76_R 0.77 0.01
72_Q 33_L 0.75 0.01
58_D 16_A 0.74 0.01
63_V 72_R 0.73 0.01
75_Q 80_S 0.73 0.01
43_I 20_A 0.73 0.01
46_K 17_L 0.73 0.01
68_N 22_S 0.73 0.01
38_Q 80_S 0.73 0.01
28_V 22_S 0.72 0.01
46_K 66_G 0.72 0.01
20_A 39_T 0.71 0.01
89_E 35_G 0.71 0.01
24_I 18_L 0.70 0.01
76_A 54_A 0.70 0.01
52_I 91_A 0.69 0.01
87_H 63_R 0.69 0.01
27_R 21_M 0.69 0.01
58_D 17_L 0.69 0.01
68_N 34_S 0.68 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.1182 seconds.