| UniProt: | P77295 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13524 | ||
| Length: | 99 (90) | ||
| Sequences: | 6005 | ||
| Seq/Len: | 66.72 |
| YGAV
Paralog alert: 0.75 [within 20: 0.14] - ratio of genomes with paralogs Cluster includes: ARSR YGAV |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 69_D | 82_K | 3.07 | 1.00 | |
| 70_S | 77_I | 3.024 | 1.00 | |
| 69_D | 80_S | 2.679 | 1.00 | |
| 38_G | 71_Q | 2.536 | 1.00 | |
| 63_R | 70_S | 2.128 | 1.00 | |
| 72_R | 77_I | 2.049 | 1.00 | |
| 38_G | 80_S | 2.03 | 1.00 | |
| 51_S | 54_A | 1.84 | 1.00 | |
| 15_A | 27_L | 1.816 | 1.00 | |
| 32_M | 47_I | 1.784 | 1.00 | |
| 20_A | 65_E | 1.741 | 1.00 | |
| 45_T | 52_A | 1.727 | 1.00 | |
| 16_A | 64_D | 1.599 | 1.00 | |
| 29_I | 55_T | 1.596 | 1.00 | |
| 12_E | 24_P | 1.586 | 1.00 | |
| 45_T | 55_T | 1.544 | 1.00 | |
| 32_M | 39_T | 1.536 | 1.00 | |
| 29_I | 44_L | 1.518 | 1.00 | |
| 73_D | 78_L | 1.486 | 1.00 | |
| 54_A | 57_Q | 1.449 | 1.00 | |
| 60_A | 64_D | 1.443 | 1.00 | |
| 25_K | 50_L | 1.412 | 1.00 | |
| 41_A | 79_Y | 1.398 | 0.99 | |
| 30_L | 67_L | 1.37 | 0.99 | |
| 23_H | 57_Q | 1.362 | 0.99 | |
| 30_L | 81_I | 1.359 | 0.99 | |
| 40_S | 76_R | 1.354 | 0.99 | |
| 59_L | 68_I | 1.344 | 0.99 | |
| 66_G | 82_K | 1.319 | 0.99 | |
| 40_S | 43_E | 1.278 | 0.99 | |
| 36_S | 39_T | 1.239 | 0.98 | |
| 11_A | 31_C | 1.217 | 0.98 | |
| 43_E | 46_R | 1.209 | 0.98 | |
| 39_T | 43_E | 1.204 | 0.98 | |
| 50_L | 55_T | 1.204 | 0.98 | |
| 73_D | 76_R | 1.185 | 0.98 | |
| 59_L | 79_Y | 1.175 | 0.98 | |
| 87_N | 91_A | 1.163 | 0.97 | |
| 39_T | 47_I | 1.159 | 0.97 | |
| 20_A | 61_R | 1.156 | 0.97 | |
| 61_R | 64_D | 1.144 | 0.97 | |
| 61_R | 65_E | 1.144 | 0.97 | |
| 15_A | 24_P | 1.116 | 0.96 | |
| 38_G | 78_L | 1.113 | 0.96 | |
| 40_S | 78_L | 1.104 | 0.96 | |
| 71_Q | 78_L | 1.099 | 0.96 | |
| 85_A | 88_A | 1.08 | 0.95 | |
| 28_L | 32_M | 1.06 | 0.95 | |
| 32_M | 44_L | 1.054 | 0.95 | |
| 71_Q | 80_S | 1.052 | 0.95 | |
| 11_A | 28_L | 1.045 | 0.94 | |
| 19_K | 22_S | 1.04 | 0.94 | |
| 41_A | 59_L | 1.028 | 0.94 | |
| 33_L | 68_I | 1.019 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2kkoA | 2 | 0.9899 | 99.6 | 0.377 | Contact Map | 0.738 |
| 3cuoA | 4 | 1 | 99.6 | 0.381 | Contact Map | 0.883 |
| 3pqkA | 6 | 0.9798 | 99.6 | 0.389 | Contact Map | 0.854 |
| 1r1tA | 2 | 0.9899 | 99.6 | 0.401 | Contact Map | 0.854 |
| 3jthA | 2 | 0.9798 | 99.6 | 0.405 | Contact Map | 0.905 |
| 1u2wA | 4 | 1 | 99.6 | 0.414 | Contact Map | 0.867 |
| 4g6qA | 2 | 0.9596 | 99.5 | 0.417 | Contact Map | 0.783 |
| 1r1uA | 4 | 0.9899 | 99.5 | 0.421 | Contact Map | 0.806 |
| 2jscA | 2 | 0.9596 | 99.5 | 0.422 | Contact Map | 0.649 |
| 2zkzA | 4 | 0.9697 | 99.5 | 0.426 | Contact Map | 0.855 |
Sequence Conservation (Image Generated using WebLogo v3)