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OPENSEQ.org

YFJU - YGAV
UniProt: P0CF86 - P77295
Length: 150
Sequences: 238
Seq/Len: 1.69
I_Prob: 0.06

YFJU - Putative arsenate reductase-like protein
Paralog alert: 0.38 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YFJU
YGAV - Probable HTH-type transcriptional regulator YgaV
Paralog alert: 0.75 [within 20: 0.14] - ratio of genomes with paralogs
Cluster includes: ARSR YGAV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
38_P 58_H 1.36 0.06
37_M 84_E 1.28 0.05
39_P 58_H 1.23 0.04
36_D 22_S 1.14 0.03
18_T 69_D 1.14 0.03
37_M 19_K 1.06 0.03
4_I 19_K 1.05 0.03
25_N 50_L 1.00 0.02
33_N 20_A 0.98 0.02
31_I 29_I 0.97 0.02
2_S 41_A 0.96 0.02
4_I 39_T 0.95 0.02
31_I 59_L 0.95 0.02
37_M 39_T 0.95 0.02
4_I 90_I 0.92 0.02
41_R 20_A 0.90 0.01
38_P 51_S 0.89 0.01
21_M 85_A 0.88 0.01
20_E 52_A 0.85 0.01
11_A 37_P 0.84 0.01
31_I 94_K 0.83 0.01
35_L 55_T 0.82 0.01
17_N 21_M 0.82 0.01
37_M 63_R 0.81 0.01
27_N 77_I 0.81 0.01
42_D 90_I 0.80 0.01
4_I 70_S 0.80 0.01
41_R 31_C 0.80 0.01
21_M 69_D 0.79 0.01
43_E 72_R 0.78 0.01
45_I 83_N 0.78 0.01
11_A 19_K 0.78 0.01
43_E 24_P 0.77 0.01
28_E 91_A 0.76 0.01
24_N 18_L 0.76 0.01
11_A 52_A 0.75 0.01
7_Y 58_H 0.74 0.01
46_K 35_G 0.74 0.01
44_L 22_S 0.74 0.01
35_L 18_L 0.73 0.01
5_T 44_L 0.73 0.01
33_N 50_L 0.73 0.01
36_D 43_E 0.73 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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