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OPENSEQ.org

RL18 - SECY
UniProt: P0C018 - P0AGA2
Length: 560
Sequences: 1054
Seq/Len: 1.91
I_Prob: 0.10

RL18 - 50S ribosomal protein L18
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL18
SECY - Protein translocase subunit SecY
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_V 379_L 1.35 0.10
37_A 183_I 1.26 0.08
39_V 196_V 1.22 0.07
69_D 229_A 1.10 0.05
54_V 95_L 1.10 0.05
85_K 132_S 1.08 0.05
86_G 176_E 1.08 0.04
72_A 95_L 1.07 0.04
103_V 343_A 1.06 0.04
31_T 94_L 1.03 0.04
29_H 265_L 1.03 0.04
49_V 129_I 1.02 0.04
46_E 256_R 1.02 0.04
36_Y 110_E 1.02 0.04
109_A 372_R 1.02 0.04
81_R 239_R 1.01 0.04
104_Q 264_H 1.01 0.04
105_A 369_V 1.00 0.03
34_H 180_E 0.99 0.03
102_R 374_T 0.99 0.03
39_V 240_G 0.98 0.03
50_A 246_V 0.97 0.03
17_K 246_V 0.97 0.03
31_T 26_V 0.96 0.03
45_S 283_I 0.96 0.03
88_K 390_F 0.95 0.03
49_V 378_A 0.95 0.03
104_Q 282_S 0.94 0.03
104_Q 128_A 0.94 0.03
108_D 407_L 0.93 0.03
56_K 177_Q 0.93 0.03
117_F 96_T 0.91 0.03
34_H 71_A 0.91 0.03
36_Y 358_P 0.90 0.03
86_G 91_I 0.90 0.03
42_P 26_V 0.90 0.02
103_V 133_I 0.90 0.02
71_A 102_L 0.90 0.02
13_R 293_W 0.90 0.02
57_A 92_I 0.88 0.02
109_A 373_L 0.88 0.02
57_A 387_I 0.87 0.02
47_V 411_V 0.87 0.02
18_L 65_N 0.87 0.02
8_I 60_I 0.86 0.02
88_K 23_L 0.86 0.02
35_I 387_I 0.86 0.02
27_V 80_L 0.86 0.02
88_K 28_G 0.85 0.02
29_H 281_S 0.85 0.02
68_K 148_L 0.85 0.02
108_D 79_A 0.85 0.02
20_E 245_V 0.85 0.02
50_A 51_K 0.85 0.02
53_T 45_D 0.85 0.02
58_I 180_E 0.85 0.02
108_D 208_E 0.84 0.02
40_I 218_L 0.84 0.02
47_V 431_S 0.84 0.02
32_P 59_T 0.84 0.02
78_V 168_T 0.84 0.02
85_K 365_Y 0.83 0.02
46_E 387_I 0.83 0.02
98_Q 370_M 0.83 0.02
55_E 104_E 0.83 0.02
85_K 238_E 0.83 0.02
42_P 416_F 0.83 0.02
19_Q 64_F 0.82 0.02
97_F 81_G 0.82 0.02
103_V 356_I 0.82 0.02
70_A 378_A 0.82 0.02
69_D 55_Q 0.82 0.02
106_L 358_P 0.81 0.02
32_P 371_T 0.81 0.02
55_E 130_F 0.81 0.02
74_V 181_R 0.81 0.02
6_A 344_D 0.80 0.02
103_V 394_A 0.80 0.02
50_A 108_E 0.80 0.02
104_Q 292_S 0.80 0.02
116_Q 383_F 0.80 0.02
43_N 77_I 0.80 0.02
113_A 32_V 0.80 0.02
9_R 289_T 0.80 0.02
76_K 344_D 0.80 0.02
28_V 262_S 0.80 0.02
103_V 307_S 0.79 0.02
95_S 293_W 0.79 0.02
81_R 200_P 0.79 0.02
116_Q 339_P 0.79 0.02
53_T 197_A 0.79 0.02
29_H 235_V 0.79 0.02
50_A 203_I 0.79 0.02
78_V 360_E 0.78 0.02
36_Y 405_S 0.78 0.01
22_G 316_L 0.78 0.01
102_R 105_I 0.78 0.01
69_D 136_A 0.78 0.01
29_H 77_I 0.78 0.01
85_K 262_S 0.78 0.01
47_V 416_F 0.77 0.01
102_R 109_G 0.77 0.01
37_A 23_L 0.77 0.01
112_E 18_E 0.77 0.01
65_T 29_A 0.77 0.01
109_A 166_T 0.77 0.01
23_A 427_S 0.77 0.01
21_L 411_V 0.77 0.01
112_E 180_E 0.77 0.01
42_P 411_V 0.77 0.01
65_T 229_A 0.77 0.01
16_R 366_I 0.76 0.01
41_A 381_I 0.76 0.01
112_E 79_A 0.76 0.01
55_E 132_S 0.76 0.01
45_S 431_S 0.76 0.01
49_V 268_K 0.76 0.01
41_A 26_V 0.76 0.01
55_E 61_I 0.76 0.01
71_A 175_G 0.76 0.01
99_Y 31_I 0.75 0.01
88_K 423_L 0.75 0.01
85_K 158_F 0.75 0.01
56_K 268_K 0.75 0.01
71_A 233_F 0.74 0.01
48_L 269_V 0.74 0.01
68_K 50_A 0.74 0.01
116_Q 165_V 0.74 0.01
88_K 128_A 0.74 0.01
46_E 126_V 0.74 0.01
80_E 107_K 0.74 0.01
88_K 151_N 0.74 0.01
109_A 199_L 0.74 0.01
60_E 304_T 0.73 0.01
50_A 201_P 0.73 0.01
6_A 148_L 0.73 0.01
6_A 31_I 0.73 0.01
24_T 11_S 0.73 0.01
43_N 129_I 0.73 0.01
95_S 247_N 0.72 0.01
104_Q 308_L 0.72 0.01
53_T 282_S 0.72 0.01
32_P 243_R 0.72 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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