| UniProt: | P0C018 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10879 | ||
| Length: | 117 (116) | ||
| Sequences: | 1377 | ||
| Seq/Len: | 11.87 |
| RL18
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 88_K | 116_Q | 3.793 | 1.00 | |
| 73_A | 76_K | 3.545 | 1.00 | |
| 89_D | 116_Q | 3.39 | 1.00 | |
| 76_K | 80_E | 2.969 | 1.00 | |
| 83_L | 88_K | 2.929 | 1.00 | |
| 68_K | 105_A | 2.787 | 1.00 | |
| 80_E | 84_E | 2.764 | 1.00 | |
| 67_N | 70_A | 2.396 | 1.00 | |
| 26_L | 37_A | 2.378 | 1.00 | |
| 11_A | 95_S | 2.259 | 1.00 | |
| 77_A | 81_R | 2.165 | 1.00 | |
| 55_E | 81_R | 2.139 | 1.00 | |
| 79_A | 113_A | 1.894 | 1.00 | |
| 39_V | 78_V | 1.849 | 1.00 | |
| 39_V | 82_A | 1.829 | 1.00 | |
| 72_A | 112_E | 1.818 | 1.00 | |
| 24_T | 42_P | 1.768 | 1.00 | |
| 35_I | 106_L | 1.744 | 1.00 | |
| 41_A | 44_G | 1.726 | 1.00 | |
| 72_A | 109_A | 1.698 | 1.00 | |
| 90_V | 117_F | 1.577 | 1.00 | |
| 109_A | 113_A | 1.566 | 1.00 | |
| 110_A | 115_L | 1.525 | 1.00 | |
| 7_R | 97_F | 1.497 | 1.00 | |
| 80_E | 83_L | 1.391 | 0.99 | |
| 46_E | 85_K | 1.352 | 0.99 | |
| 20_E | 24_T | 1.336 | 0.99 | |
| 6_A | 10_R | 1.325 | 0.99 | |
| 27_V | 95_S | 1.318 | 0.99 | |
| 39_V | 87_I | 1.29 | 0.99 | |
| 30_R | 102_R | 1.277 | 0.99 | |
| 72_A | 76_K | 1.272 | 0.99 | |
| 106_L | 109_A | 1.262 | 0.99 | |
| 8_I | 12_T | 1.234 | 0.98 | |
| 39_V | 90_V | 1.231 | 0.98 | |
| 79_A | 109_A | 1.205 | 0.98 | |
| 53_T | 70_A | 1.183 | 0.98 | |
| 76_K | 112_E | 1.174 | 0.98 | |
| 82_A | 115_L | 1.164 | 0.97 | |
| 69_D | 72_A | 1.143 | 0.97 | |
| 2_D | 5_S | 1.115 | 0.96 | |
| 27_V | 40_I | 1.11 | 0.96 | |
| 37_A | 78_V | 1.108 | 0.96 | |
| 12_T | 16_R | 1.106 | 0.96 | |
| 51_A | 77_A | 1.1 | 0.96 | |
| 34_H | 53_T | 1.086 | 0.96 | |
| 67_N | 102_R | 1.053 | 0.95 | |
| 48_L | 87_I | 1.05 | 0.94 | |
| 104_Q | 108_D | 1.043 | 0.94 | |
| 68_K | 72_A | 1.031 | 0.94 | |
| 81_R | 85_K | 1.02 | 0.93 | |
| 56_K | 60_E | 1.004 | 0.93 | |
| 77_A | 80_E | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3bboQ | 1 | 1 | 100 | 0.133 | Contact Map | 0.475 |
| 4kixO | 1 | 1 | 100 | 0.15 | Contact Map | 0.695 |
| 3v2dS | 1 | 0.9573 | 100 | 0.165 | Contact Map | 0.647 |
| 1ovyA | 1 | 0.9829 | 100 | 0.179 | Contact Map | 0.479 |
| 2zjrL | 1 | 0.9402 | 100 | 0.189 | Contact Map | 0.405 |
| 1vq8N | 1 | 0.9829 | 100 | 0.272 | Contact Map | 0.679 |
| 3j3bD | 1 | 1 | 100 | 0.273 | Contact Map | 0.516 |
| 3j39D | 1 | 1 | 100 | 0.28 | Contact Map | 0.573 |
| 3j21O | 1 | 0.9829 | 100 | 0.285 | Contact Map | 0.695 |
| 4a17M | 1 | 1 | 100 | 0.288 | Contact Map | 0.519 |
Sequence Conservation (Image Generated using WebLogo v3)