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OPENSEQ.org

NUSG - RL11
UniProt: P0AFG0 - P0A7J7
Length: 323
Sequences: 878
Seq/Len: 2.76
I_Prob: 0.00

NUSG - Transcription antitermination protein NusG
Paralog alert: 0.28 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NUSG RFAH
RL11 - 50S ribosomal protein L11
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL11
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
85_S 114_A 0.98 0.00
146_G 14_A 0.93 0.00
21_R 118_T 0.92 0.00
106_K 121_D 0.91 0.00
101_A 138_L 0.88 0.00
98_D 80_L 0.83 0.00
133_M 77_A 0.82 0.00
83_V 4_K 0.82 0.00
69_V 71_T 0.81 0.00
140_P 39_C 0.80 0.00
42_V 123_E 0.80 0.00
80_W 57_V 0.80 0.00
20_G 90_S 0.80 0.00
159_K 45_K 0.79 0.00
21_R 65_R 0.78 0.00
42_V 107_Q 0.77 0.00
144_F 36_M 0.75 0.00
159_K 48_S 0.75 0.00
162_V 121_D 0.74 0.00
42_V 99_G 0.74 0.00
173_L 95_K 0.74 0.00
12_V 44_A 0.74 0.00
39_F 13_V 0.73 0.00
151_V 44_A 0.73 0.00
65_F 120_A 0.72 0.00
93_I 31_Q 0.72 0.00
95_G 60_T 0.72 0.00
138_D 121_D 0.71 0.00
121_K 129_I 0.71 0.00
154_E 36_M 0.71 0.00
131_G 62_Y 0.70 0.00
115_L 120_A 0.70 0.00
21_R 128_S 0.69 0.00
44_V 32_G 0.69 0.00
95_G 99_G 0.69 0.00
163_S 36_M 0.68 0.00
87_P 63_A 0.68 0.00
125_K 128_S 0.68 0.00
132_E 122_I 0.68 0.00
153_Y 122_I 0.67 0.00
130_P 98_V 0.67 0.00
58_R 94_N 0.66 0.00
57_R 102_S 0.66 0.00
101_A 85_G 0.66 0.00
145_N 91_G 0.66 0.00
114_R 77_A 0.66 0.00
159_K 95_K 0.66 0.00
26_L 100_K 0.65 0.00
18_F 31_Q 0.65 0.00
73_M 16_G 0.65 0.00
161_S 85_G 0.65 0.00
30_I 106_L 0.64 0.00
116_Q 55_I 0.64 0.00
63_K 78_V 0.64 0.00
64_F 42_F 0.64 0.00
75_M 112_T 0.64 0.00
41_E 62_Y 0.63 0.00
151_V 142_D 0.63 0.00
158_L 8_Y 0.63 0.00
56_Q 17_M 0.63 0.00
17_G 91_G 0.63 0.00
178_V 121_D 0.62 0.00
106_K 122_I 0.62 0.00
88_R 132_T 0.62 0.00
157_R 54_P 0.62 0.00
38_L 5_V 0.62 0.00
72_Q 63_A 0.62 0.00
143_D 140_V 0.62 0.00
110_A 96_D 0.62 0.00
111_I 123_E 0.62 0.00
141_F 36_M 0.61 0.00
103_I 138_L 0.61 0.00
30_I 124_A 0.61 0.00
37_D 84_A 0.61 0.00
141_F 68_T 0.61 0.00
172_E 66_S 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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