| UniProt: | P0AFG0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10667 | ||
| Length: | 181 (176) | ||
| Sequences: | 1624 | ||
| Seq/Len: | 9.23 |
| NUSG
Paralog alert: 0.28 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: NUSG RFAH |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 23_A | 27_R | 4.699 | 1.00 | |
| 105_D | 109_D | 3.747 | 1.00 | |
| 41_E | 72_Q | 3.63 | 1.00 | |
| 38_L | 76_N | 3.587 | 1.00 | |
| 31_K | 36_E | 3.116 | 1.00 | |
| 135_R | 179_E | 3.052 | 1.00 | |
| 158_L | 178_V | 2.97 | 1.00 | |
| 40_G | 72_Q | 2.838 | 1.00 | |
| 48_E | 59_K | 2.549 | 1.00 | |
| 150_E | 159_K | 2.423 | 1.00 | |
| 48_E | 61_E | 2.163 | 1.00 | |
| 132_E | 180_K | 2.034 | 1.00 | |
| 157_R | 174_D | 2.018 | 1.00 | |
| 22_V | 89_V | 1.878 | 1.00 | |
| 47_E | 62_R | 1.831 | 1.00 | |
| 51_E | 62_R | 1.82 | 1.00 | |
| 138_D | 177_Q | 1.77 | 1.00 | |
| 157_R | 172_E | 1.752 | 1.00 | |
| 173_L | 177_Q | 1.598 | 1.00 | |
| 133_M | 145_N | 1.569 | 1.00 | |
| 29_H | 86_V | 1.548 | 1.00 | |
| 73_M | 79_S | 1.546 | 1.00 | |
| 22_V | 69_V | 1.545 | 1.00 | |
| 64_F | 70_L | 1.536 | 1.00 | |
| 130_P | 151_V | 1.515 | 1.00 | |
| 46_T | 61_E | 1.499 | 1.00 | |
| 50_V | 57_R | 1.48 | 1.00 | |
| 73_M | 83_V | 1.469 | 1.00 | |
| 146_G | 160_V | 1.419 | 0.99 | |
| 104_S | 107_E | 1.401 | 0.99 | |
| 129_E | 132_E | 1.368 | 0.99 | |
| 53_R | 58_R | 1.363 | 0.99 | |
| 149_E | 161_S | 1.349 | 0.99 | |
| 18_F | 88_R | 1.334 | 0.99 | |
| 13_Q | 90_M | 1.315 | 0.99 | |
| 135_R | 145_N | 1.314 | 0.99 | |
| 65_F | 111_I | 1.3 | 0.99 | |
| 26_L | 83_V | 1.295 | 0.99 | |
| 7_K | 72_Q | 1.292 | 0.99 | |
| 15_F | 18_F | 1.267 | 0.98 | |
| 50_V | 59_K | 1.236 | 0.98 | |
| 26_L | 30_I | 1.229 | 0.98 | |
| 72_Q | 105_D | 1.219 | 0.98 | |
| 100_P | 141_F | 1.217 | 0.98 | |
| 24_T | 28_E | 1.21 | 0.98 | |
| 135_R | 143_D | 1.209 | 0.98 | |
| 152_D | 155_K | 1.2 | 0.98 | |
| 21_R | 24_T | 1.194 | 0.97 | |
| 14_A | 19_E | 1.176 | 0.97 | |
| 106_K | 109_D | 1.173 | 0.97 | |
| 13_Q | 91_G | 1.17 | 0.97 | |
| 65_F | 70_L | 1.166 | 0.97 | |
| 160_V | 173_L | 1.163 | 0.97 | |
| 80_W | 84_R | 1.16 | 0.97 | |
| 158_L | 175_F | 1.148 | 0.97 | |
| 21_R | 25_S | 1.131 | 0.96 | |
| 49_V | 62_R | 1.121 | 0.96 | |
| 25_S | 29_H | 1.119 | 0.96 | |
| 76_N | 79_S | 1.112 | 0.96 | |
| 173_L | 178_V | 1.108 | 0.96 | |
| 132_E | 148_V | 1.1 | 0.95 | |
| 161_S | 168_A | 1.096 | 0.95 | |
| 30_I | 39_F | 1.088 | 0.95 | |
| 24_T | 79_S | 1.088 | 0.95 | |
| 160_V | 170_P | 1.072 | 0.94 | |
| 93_I | 153_Y | 1.067 | 0.94 | |
| 108_V | 112_M | 1.057 | 0.94 | |
| 22_V | 86_V | 1.044 | 0.93 | |
| 174_D | 177_Q | 1.043 | 0.93 | |
| 11_V | 103_I | 1.038 | 0.93 | |
| 25_S | 86_V | 1.037 | 0.93 | |
| 152_D | 172_E | 1.037 | 0.93 | |
| 94_G | 102_P | 1.019 | 0.92 | |
| 27_R | 41_E | 1.017 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2jvvA | 1 | 0.9945 | 100 | 0.086 | Contact Map | 0.771 |
| 1m1hA | 1 | 0.9834 | 100 | 0.132 | Contact Map | 0.695 |
| 2lq8A | 1 | 0.9337 | 100 | 0.146 | Contact Map | 0.617 |
| 2ougA | 4 | 0.8895 | 100 | 0.178 | Contact Map | 0.613 |
| 2xhcA | 1 | 0.9171 | 100 | 0.301 | Contact Map | 0.498 |
| 3p8bB | 2 | 0.7956 | 100 | 0.345 | Contact Map | 0.777 |
| 1nz8A | 1 | 0.6243 | 100 | 0.42 | Contact Map | 0.517 |
| 3lpeA | 4 | 0.4917 | 99.8 | 0.595 | Contact Map | 0.586 |
| 1nz9A | 1 | 0.3204 | 99.2 | 0.716 | Contact Map | 0.77 |
| 2e6zA | 1 | 0.326 | 99.1 | 0.729 | Contact Map | 0.678 |
Sequence Conservation (Image Generated using WebLogo v3)