| UniProt: | P0A7J7 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10872 | ||
| Length: | 142 (142) | ||
| Sequences: | 1258 | ||
| Seq/Len: | 8.86 |
| RL11
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 37_E | 41_A | 4.068 | 1.00 | |
| 80_L | 138_L | 3.9 | 1.00 | |
| 100_K | 139_V | 3.454 | 1.00 | |
| 92_K | 96_D | 3.389 | 1.00 | |
| 80_L | 101_I | 3.187 | 1.00 | |
| 107_Q | 111_Q | 2.913 | 1.00 | |
| 7_A | 31_Q | 2.654 | 1.00 | |
| 44_A | 47_D | 2.614 | 1.00 | |
| 33_V | 61_V | 2.601 | 1.00 | |
| 100_K | 141_E | 2.502 | 1.00 | |
| 102_S | 105_Q | 2.405 | 1.00 | |
| 26_P | 30_Q | 2.333 | 1.00 | |
| 17_M | 51_K | 2.218 | 1.00 | |
| 103_R | 130_E | 2.206 | 1.00 | |
| 76_A | 129_I | 2.149 | 1.00 | |
| 53_L | 78_V | 2.039 | 1.00 | |
| 107_Q | 126_T | 2.02 | 1.00 | |
| 55_I | 71_T | 1.977 | 1.00 | |
| 104_A | 107_Q | 1.915 | 1.00 | |
| 83_A | 108_E | 1.909 | 1.00 | |
| 9_V | 61_V | 1.896 | 1.00 | |
| 5_V | 60_T | 1.828 | 1.00 | |
| 92_K | 95_K | 1.825 | 1.00 | |
| 19_N | 39_C | 1.761 | 1.00 | |
| 13_V | 24_V | 1.753 | 1.00 | |
| 4_K | 63_A | 1.752 | 1.00 | |
| 106_L | 130_E | 1.606 | 1.00 | |
| 103_R | 126_T | 1.589 | 1.00 | |
| 84_A | 101_I | 1.542 | 1.00 | |
| 94_N | 97_K | 1.51 | 1.00 | |
| 81_K | 88_S | 1.466 | 1.00 | |
| 108_E | 111_Q | 1.408 | 0.99 | |
| 97_K | 139_V | 1.387 | 0.99 | |
| 103_R | 142_D | 1.384 | 0.99 | |
| 104_A | 108_E | 1.374 | 0.99 | |
| 14_A | 17_M | 1.359 | 0.99 | |
| 41_A | 45_K | 1.354 | 0.99 | |
| 120_A | 124_A | 1.35 | 0.99 | |
| 106_L | 126_T | 1.314 | 0.99 | |
| 9_V | 31_Q | 1.284 | 0.98 | |
| 91_G | 96_D | 1.28 | 0.98 | |
| 81_K | 86_I | 1.28 | 0.98 | |
| 121_D | 124_A | 1.278 | 0.98 | |
| 88_S | 91_G | 1.268 | 0.98 | |
| 17_M | 50_E | 1.267 | 0.98 | |
| 122_I | 126_T | 1.262 | 0.98 | |
| 90_S | 94_N | 1.226 | 0.98 | |
| 111_Q | 122_I | 1.225 | 0.98 | |
| 73_T | 115_A | 1.193 | 0.97 | |
| 86_I | 138_L | 1.184 | 0.97 | |
| 36_M | 39_C | 1.155 | 0.96 | |
| 79_L | 112_T | 1.145 | 0.96 | |
| 114_A | 119_G | 1.134 | 0.96 | |
| 105_Q | 108_E | 1.133 | 0.96 | |
| 107_Q | 122_I | 1.129 | 0.96 | |
| 99_G | 138_L | 1.123 | 0.96 | |
| 117_M | 125_M | 1.122 | 0.96 | |
| 55_I | 74_P | 1.112 | 0.95 | |
| 42_F | 58_V | 1.11 | 0.95 | |
| 106_L | 129_I | 1.102 | 0.95 | |
| 8_Y | 58_V | 1.101 | 0.95 | |
| 36_M | 40_K | 1.093 | 0.95 | |
| 23_P | 26_P | 1.086 | 0.95 | |
| 127_R | 130_E | 1.078 | 0.94 | |
| 108_E | 112_T | 1.075 | 0.94 | |
| 123_E | 126_T | 1.055 | 0.93 | |
| 118_T | 128_S | 1.015 | 0.91 | |
| 126_T | 130_E | 1.013 | 0.91 | |
| 90_S | 97_K | 1.007 | 0.91 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kixI | 1 | 1 | 100 | 0.082 | Contact Map | 0.34 |
| 3bboK | 1 | 0.993 | 100 | 0.095 | Contact Map | 0.574 |
| 1mmsA | 2 | 0.9859 | 100 | 0.108 | Contact Map | 0.85 |
| 3j21H | 1 | 0.9718 | 100 | 0.109 | Contact Map | 0.469 |
| 3egvB | 1 | 0.9789 | 100 | 0.114 | Contact Map | 0.786 |
| 2ftcG | 1 | 0.9859 | 100 | 0.121 | Contact Map | 0.076 |
| 1vq8I | 1 | 0.9648 | 100 | 0.121 | Contact Map | 0.719 |
| 3iz5J | 1 | 0.9789 | 100 | 0.16 | Contact Map | 0.494 |
| 3zf7M | 1 | 0.9648 | 100 | 0.174 | Contact Map | 0.245 |
| 3j3bK | 1 | 0.9789 | 100 | 0.175 | Contact Map | 0.198 |
Sequence Conservation (Image Generated using WebLogo v3)