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OPENSEQ.org

SKP - TAMA
UniProt: P0AEU7 - P0ADE4
Length: 738
Sequences: 415
Seq/Len: 0.61
I_Prob: 0.11

SKP - Chaperone protein skp
Paralog alert: 0.11 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: SKP
TAMA - Translocation and assembly module TamA
Paralog alert: 0.76 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: TAMA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
25_A 468_F 1.85 0.11
28_N 291_M 1.34 0.03
117_V 225_E 1.27 0.02
57_L 392_I 1.26 0.02
32_L 349_L 1.25 0.02
134_D 233_T 1.24 0.02
37_A 402_M 1.22 0.02
25_A 444_R 1.20 0.02
86_D 393_S 1.19 0.02
127_V 542_V 1.13 0.01
24_I 74_Y 1.11 0.01
25_A 416_S 1.10 0.01
153_T 570_Y 1.10 0.01
28_N 286_W 1.09 0.01
64_L 289_P 1.09 0.01
143_A 178_F 1.08 0.01
153_T 265_E 1.08 0.01
101_F 317_M 1.07 0.01
92_Q 103_P 1.07 0.01
62_T 65_I 1.06 0.01
160_V 483_S 1.04 0.01
109_S 194_V 1.03 0.01
77_G 390_V 1.02 0.01
124_V 522_S 1.02 0.01
53_R 546_S 1.00 0.01
144_Y 264_T 1.00 0.01
157_L 94_L 1.00 0.01
80_R 476_I 1.00 0.01
115_K 554_D 0.99 0.01
50_F 392_I 0.99 0.01
81_T 194_V 0.99 0.01
153_T 304_I 0.99 0.01
84_E 401_L 0.98 0.01
132_D 506_Y 0.98 0.01
144_Y 533_D 0.97 0.01
84_E 446_V 0.97 0.01
143_A 286_W 0.97 0.01
152_I 468_F 0.97 0.01
116_L 458_D 0.97 0.01
102_E 395_T 0.97 0.01
24_I 235_W 0.97 0.01
153_T 421_G 0.96 0.01
50_F 544_W 0.96 0.01
65_Q 84_R 0.96 0.01
37_A 526_V 0.96 0.01
151_D 351_A 0.96 0.01
69_K 237_N 0.95 0.01
120_I 292_N 0.95 0.01
124_V 84_R 0.94 0.01
128_A 230_L 0.94 0.01
58_Q 298_L 0.94 0.01
33_F 281_R 0.93 0.01
27_V 330_V 0.93 0.01
73_S 527_S 0.93 0.01
21_A 196_F 0.93 0.01
23_K 94_L 0.93 0.01
142_V 573_L 0.92 0.01
137_V 68_G 0.92 0.01
86_D 108_G 0.92 0.01
102_E 314_S 0.92 0.01
7_A 371_L 0.91 0.01
32_L 451_L 0.91 0.01
80_R 150_T 0.91 0.01
155_D 469_F 0.91 0.01
147_S 96_A 0.91 0.01
35_Q 223_L 0.91 0.01
28_N 444_R 0.91 0.01
84_E 268_I 0.91 0.01
107_R 526_V 0.90 0.01
60_M 480_K 0.90 0.01
33_F 428_V 0.90 0.01
141_A 395_T 0.89 0.01
27_V 125_K 0.89 0.01
20_A 415_Y 0.89 0.01
88_M 317_M 0.88 0.01
26_I 346_S 0.88 0.01
75_K 384_M 0.88 0.01
156_V 516_G 0.88 0.01
30_G 474_R 0.88 0.01
76_A 411_Y 0.88 0.01
71_L 149_L 0.88 0.01
133_I 280_P 0.88 0.01
126_S 336_R 0.88 0.01
63_D 174_L 0.88 0.01
136_V 292_N 0.87 0.01
98_A 261_S 0.87 0.01
75_K 62_D 0.87 0.01
46_L 62_D 0.87 0.01
136_V 490_N 0.87 0.01
27_V 78_T 0.87 0.01
123_A 153_A 0.87 0.01
28_N 359_S 0.87 0.01
22_D 223_L 0.87 0.01
90_Q 68_G 0.86 0.01
143_A 350_V 0.86 0.01
144_Y 183_Y 0.86 0.01
48_N 65_I 0.86 0.01
54_A 524_E 0.86 0.01
144_Y 140_G 0.86 0.01
160_V 66_R 0.86 0.01
117_V 522_S 0.86 0.01
32_L 137_L 0.86 0.01
50_F 359_S 0.86 0.01
27_V 268_I 0.86 0.01
127_V 286_W 0.86 0.01
28_N 436_I 0.85 0.01
139_A 468_F 0.85 0.01
57_L 465_D 0.85 0.01
123_A 363_R 0.85 0.01
78_S 149_L 0.85 0.01
75_K 506_Y 0.85 0.01
143_A 171_A 0.85 0.01
49_E 565_H 0.85 0.01
46_L 388_P 0.85 0.01
62_T 251_T 0.84 0.01
84_E 109_T 0.84 0.01
137_V 152_I 0.84 0.00
79_D 482_K 0.84 0.00
81_T 527_S 0.84 0.00
120_I 133_I 0.84 0.00
98_A 556_A 0.83 0.00
26_I 345_D 0.83 0.00
99_Q 161_S 0.83 0.00
53_R 214_E 0.83 0.00
113_R 194_V 0.83 0.00
135_L 405_W 0.83 0.00
147_S 135_T 0.83 0.00
41_G 459_F 0.83 0.00
27_V 248_A 0.83 0.00
32_L 89_K 0.83 0.00
104_D 98_V 0.83 0.00
45_T 96_A 0.83 0.00
40_T 417_N 0.83 0.00
32_L 103_P 0.83 0.00
81_T 299_T 0.83 0.00
43_S 223_L 0.83 0.00
131_Q 233_T 0.83 0.00
21_A 285_T 0.82 0.00
124_V 312_D 0.82 0.00
32_L 437_R 0.82 0.00
40_T 369_W 0.82 0.00
8_A 210_V 0.82 0.00
127_V 226_L 0.82 0.00
26_I 522_S 0.82 0.00
129_N 89_K 0.82 0.00
62_T 332_G 0.82 0.00
160_V 204_E 0.81 0.00
144_Y 520_V 0.81 0.00
154_A 132_A 0.81 0.00
131_Q 572_G 0.81 0.00
136_V 289_P 0.81 0.00
50_F 188_R 0.81 0.00
142_V 233_T 0.81 0.00
105_R 357_L 0.81 0.00
34_Q 298_L 0.81 0.00
126_S 240_V 0.80 0.00
70_K 438_T 0.80 0.00
127_V 576_E 0.80 0.00
32_L 390_V 0.80 0.00
153_T 426_F 0.80 0.00
146_S 141_D 0.80 0.00
63_D 175_H 0.80 0.00
112_E 517_A 0.80 0.00
66_A 351_A 0.80 0.00
133_I 390_V 0.80 0.00
150_K 138_N 0.80 0.00
84_E 107_G 0.80 0.00
87_V 272_V 0.80 0.00
155_D 363_R 0.80 0.00
108_R 515_W 0.79 0.00
57_L 224_A 0.79 0.00
78_S 564_E 0.79 0.00
14_L 158_Y 0.79 0.00
99_Q 81_F 0.79 0.00
141_A 275_S 0.79 0.00
109_S 570_Y 0.79 0.00
134_D 108_G 0.79 0.00
60_M 191_F 0.78 0.00
127_V 437_R 0.78 0.00
136_V 413_I 0.78 0.00
88_M 542_V 0.78 0.00
137_V 240_V 0.78 0.00
55_S 302_T 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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