| UniProt: | P0AEU7 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10455 | ||
| Length: | 161 (160) | ||
| Sequences: | 780 | ||
| Seq/Len: | 4.88 |
| SKP
Paralog alert: 0.11 [within 20: 0.08] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 131_Q | 155_D | 3.259 | 1.00 | |
| 130_S | 159_Q | 2.472 | 1.00 | |
| 51_K | 55_S | 2.385 | 1.00 | |
| 128_A | 136_V | 2.326 | 1.00 | |
| 65_Q | 69_K | 2.322 | 1.00 | |
| 79_D | 82_K | 2.141 | 1.00 | |
| 126_S | 159_Q | 2.023 | 1.00 | |
| 42_V | 116_L | 2.013 | 1.00 | |
| 28_N | 139_A | 2.001 | 1.00 | |
| 92_Q | 96_Q | 1.983 | 1.00 | |
| 108_R | 111_E | 1.957 | 1.00 | |
| 125_K | 129_N | 1.894 | 1.00 | |
| 118_T | 122_T | 1.892 | 1.00 | |
| 67_K | 90_Q | 1.877 | 1.00 | |
| 49_E | 108_R | 1.833 | 1.00 | |
| 37_A | 161_K | 1.829 | 1.00 | |
| 81_T | 85_K | 1.816 | 1.00 | |
| 47_E | 51_K | 1.741 | 1.00 | |
| 66_A | 70_K | 1.717 | 1.00 | |
| 83_L | 86_D | 1.697 | 0.99 | |
| 64_L | 87_V | 1.684 | 0.99 | |
| 54_A | 58_Q | 1.648 | 0.99 | |
| 77_G | 81_T | 1.637 | 0.99 | |
| 44_N | 47_E | 1.636 | 0.99 | |
| 127_V | 156_V | 1.606 | 0.99 | |
| 63_D | 67_K | 1.585 | 0.99 | |
| 96_Q | 100_A | 1.578 | 0.99 | |
| 58_Q | 62_T | 1.526 | 0.99 | |
| 38_Q | 119_R | 1.479 | 0.98 | |
| 108_R | 112_E | 1.464 | 0.98 | |
| 75_K | 83_L | 1.444 | 0.98 | |
| 112_E | 115_K | 1.442 | 0.98 | |
| 62_T | 66_A | 1.415 | 0.97 | |
| 154_A | 158_K | 1.403 | 0.97 | |
| 60_M | 93_T | 1.345 | 0.96 | |
| 53_R | 104_D | 1.328 | 0.96 | |
| 33_F | 105_R | 1.311 | 0.96 | |
| 31_S | 35_Q | 1.311 | 0.96 | |
| 136_V | 152_I | 1.299 | 0.95 | |
| 82_K | 86_D | 1.291 | 0.95 | |
| 40_T | 44_N | 1.291 | 0.95 | |
| 26_I | 135_L | 1.282 | 0.95 | |
| 29_M | 43_S | 1.282 | 0.95 | |
| 84_E | 89_A | 1.246 | 0.94 | |
| 57_L | 101_F | 1.239 | 0.93 | |
| 41_G | 45_T | 1.233 | 0.93 | |
| 56_E | 59_R | 1.22 | 0.93 | |
| 61_E | 94_F | 1.216 | 0.93 | |
| 36_V | 120_I | 1.205 | 0.92 | |
| 137_V | 142_V | 1.195 | 0.92 | |
| 31_S | 157_L | 1.191 | 0.92 | |
| 45_T | 112_E | 1.155 | 0.90 | |
| 28_N | 31_S | 1.142 | 0.89 | |
| 68_M | 72_Q | 1.122 | 0.88 | |
| 25_A | 152_I | 1.11 | 0.87 | |
| 71_L | 80_R | 1.106 | 0.87 | |
| 71_L | 84_E | 1.075 | 0.85 | |
| 107_R | 111_E | 1.074 | 0.85 | |
| 64_L | 94_F | 1.068 | 0.84 | |
| 71_L | 94_F | 1.062 | 0.84 | |
| 32_L | 157_L | 1.058 | 0.84 | |
| 55_S | 59_R | 1.051 | 0.83 | |
| 150_K | 155_D | 1.043 | 0.82 | |
| 109_S | 117_V | 1.036 | 0.82 | |
| 49_E | 53_R | 1.035 | 0.82 | |
| 69_K | 72_Q | 1.023 | 0.81 | |
| 106_A | 117_V | 1.021 | 0.80 | |
| 56_E | 97_K | 1.011 | 0.80 | |
| 64_L | 68_M | 1.004 | 0.79 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1u2mA | 3 | 0.8882 | 100 | 0.205 | Contact Map | 0.628 |
| 4kqtA | 1 | 0.9938 | 100 | 0.217 | Contact Map | 0.542 |
| 2ld3A | 1 | 0.5404 | 26.1 | 0.916 | Contact Map | 0.342 |
| 4etpB | 1 | 0.6894 | 23.3 | 0.918 | Contact Map | 0.235 |
| 3ioxA | 1 | 0.7516 | 18.6 | 0.922 | Contact Map | 0.256 |
| 1fxkC | 1 | 0.4658 | 16.9 | 0.924 | Contact Map | 0.006 |
| 2dfsA | 2 | 0.7888 | 14.7 | 0.925 | Contact Map | 0.321 |
| 1dj7A | 1 | 0.2733 | 14.6 | 0.926 | Contact Map | 0.067 |
| 3errA | 2 | 0.6273 | 14.5 | 0.926 | Contact Map | 0.31 |
| 2zdiC | 1 | 0.5093 | 10.6 | 0.93 | Contact Map | 0.073 |
Sequence Conservation (Image Generated using WebLogo v3)