May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FLGC - FLGD
UniProt: P0ABX2 - P75936
Length: 365
Sequences: 316
Seq/Len: 0.93
I_Prob: 0.06

FLGC - Flagellar basal-body rod protein FlgC
Paralog alert: 0.12 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLGC
FLGD - Basal-body rod modification protein FlgD
Paralog alert: 0.14 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLGD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
47_V 58_T 1.61 0.06
14_L 53_E 1.51 0.04
43_R 92_A 1.38 0.03
112_Y 52_M 1.30 0.02
31_A 180_N 1.28 0.02
86_D 174_A 1.27 0.02
113_Q 54_N 1.22 0.02
67_V 209_N 1.21 0.02
96_V 39_L 1.21 0.02
14_L 175_P 1.19 0.02
10_A 109_A 1.16 0.01
13_A 182_A 1.16 0.01
94_P 179_Y 1.15 0.01
82_N 37_T 1.14 0.01
132_L 220_G 1.14 0.01
9_I 67_V 1.13 0.01
10_A 37_T 1.13 0.01
129_T 47_D 1.11 0.01
63_K 94_N 1.10 0.01
17_Q 73_L 1.10 0.01
15_T 182_A 1.09 0.01
41_P 89_S 1.09 0.01
64_V 157_A 1.09 0.01
109_S 214_L 1.07 0.01
9_I 93_S 1.07 0.01
28_L 188_G 1.07 0.01
18_S 216_L 1.07 0.01
21_L 91_Q 1.06 0.01
43_R 189_G 1.04 0.01
39_G 132_A 1.04 0.01
94_P 177_G 1.04 0.01
104_N 77_L 1.04 0.01
99_V 229_Q 1.04 0.01
87_A 227_V 1.04 0.01
79_E 198_Q 1.03 0.01
97_D 80_I 1.02 0.01
81_G 55_N 1.01 0.01
43_R 224_L 1.01 0.01
14_L 132_A 1.01 0.01
28_L 194_A 1.01 0.01
129_T 69_G 1.01 0.01
109_S 91_Q 1.00 0.01
28_L 55_N 1.00 0.01
122_V 129_Q 0.99 0.01
107_S 88_Q 0.99 0.01
117_E 69_G 0.99 0.01
92_K 96_I 0.99 0.01
9_I 108_L 0.98 0.01
92_K 194_A 0.98 0.01
9_I 82_G 0.98 0.01
67_V 173_T 0.97 0.01
127_L 74_N 0.96 0.01
32_D 94_N 0.96 0.01
113_Q 76_T 0.96 0.01
7_F 164_W 0.95 0.01
5_N 206_I 0.95 0.01
117_E 95_L 0.95 0.01
44_A 69_G 0.95 0.01
90_Y 135_V 0.94 0.01
99_V 139_I 0.94 0.01
134_Q 76_T 0.94 0.01
75_K 104_G 0.94 0.01
112_Y 47_D 0.94 0.01
117_E 63_Q 0.94 0.01
10_A 220_G 0.94 0.01
125_M 167_T 0.93 0.01
94_P 207_R 0.93 0.01
84_L 189_G 0.93 0.01
15_T 38_L 0.92 0.01
39_G 58_T 0.92 0.01
92_K 218_T 0.92 0.01
114_A 68_S 0.92 0.01
117_E 45_N 0.91 0.01
18_S 202_V 0.91 0.01
132_L 177_G 0.91 0.01
125_M 76_T 0.91 0.01
44_A 220_G 0.91 0.01
48_V 153_G 0.91 0.01
26_S 69_G 0.91 0.01
92_K 53_E 0.91 0.01
60_G 41_A 0.90 0.01
125_M 86_N 0.90 0.01
87_A 67_V 0.90 0.01
61_G 224_L 0.89 0.01
106_M 183_I 0.89 0.01
43_R 28_A 0.89 0.01
124_S 147_V 0.89 0.01
22_N 153_G 0.89 0.01
124_S 41_A 0.89 0.01
132_L 61_L 0.89 0.01
94_P 229_Q 0.89 0.01
14_L 218_T 0.88 0.01
103_V 142_K 0.88 0.01
107_S 90_L 0.88 0.01
2_A 190_T 0.88 0.01
34_V 155_L 0.88 0.01
133_G 88_Q 0.88 0.01
21_L 98_H 0.88 0.01
77_V 58_T 0.88 0.01
23_V 83_Q 0.88 0.01
70_S 109_A 0.88 0.01
128_K 43_L 0.87 0.01
108_A 222_T 0.87 0.01
69_E 90_L 0.87 0.01
64_V 126_V 0.87 0.01
87_A 40_V 0.87 0.01
126_M 49_T 0.87 0.01
33_S 66_T 0.86 0.01
92_K 219_Y 0.86 0.01
56_G 77_L 0.86 0.01
99_V 73_L 0.86 0.01
94_P 205_V 0.86 0.01
126_M 204_G 0.86 0.01
75_K 219_Y 0.86 0.01
78_Y 196_P 0.85 0.01
86_D 111_T 0.85 0.01
125_M 190_T 0.85 0.01
114_A 61_L 0.85 0.01
109_S 204_G 0.85 0.01
15_T 229_Q 0.85 0.01
111_S 49_T 0.85 0.01
47_V 160_H 0.84 0.01
68_I 156_T 0.84 0.01
58_A 180_N 0.84 0.01
15_T 109_A 0.84 0.01
39_G 39_L 0.84 0.01
106_M 74_N 0.84 0.01
39_G 64_I 0.84 0.01
36_G 204_G 0.84 0.01
13_A 104_G 0.84 0.01
21_L 133_D 0.84 0.01
31_A 86_N 0.84 0.01
68_I 85_D 0.83 0.01
90_Y 162_F 0.83 0.01
97_D 129_Q 0.83 0.01
107_S 202_V 0.83 0.01
109_S 227_V 0.83 0.01
86_D 120_T 0.83 0.01
19_Q 40_V 0.83 0.01
78_Y 214_L 0.83 0.01
9_I 80_I 0.83 0.01
56_G 188_G 0.83 0.01
34_V 95_L 0.82 0.01
113_Q 200_A 0.82 0.01
88_K 225_D 0.82 0.01
88_K 203_Q 0.82 0.01
43_R 68_S 0.82 0.01
111_S 59_S 0.81 0.01
14_L 183_I 0.81 0.01
48_V 170_D 0.81 0.01
112_Y 40_V 0.81 0.01
13_A 64_I 0.81 0.01
91_V 40_V 0.81 0.01
34_V 139_I 0.81 0.01
111_S 95_L 0.81 0.01
123_K 227_V 0.81 0.01
86_D 167_T 0.81 0.01
55_P 188_G 0.81 0.01
11_G 98_H 0.81 0.01
13_A 76_T 0.80 0.00
74_D 68_S 0.80 0.00
124_S 141_D 0.80 0.00
2_A 29_A 0.80 0.00
121_T 36_L 0.80 0.00
5_N 230_I 0.80 0.00
71_Q 180_N 0.80 0.00
125_M 107_V 0.80 0.00
101_E 39_L 0.80 0.00
67_V 94_N 0.80 0.00
73_P 131_A 0.80 0.00
35_T 57_L 0.80 0.00
41_P 217_G 0.80 0.00
10_A 221_T 0.80 0.00
114_A 206_I 0.80 0.00
37_P 194_A 0.79 0.00
78_Y 179_Y 0.79 0.00
12_S 90_L 0.79 0.00
91_V 65_S 0.79 0.00
28_L 184_S 0.79 0.00
53_A 120_T 0.79 0.00
121_T 69_G 0.79 0.00
8_D 83_Q 0.79 0.00
104_N 68_S 0.79 0.00
97_D 138_T 0.79 0.00
21_L 96_I 0.79 0.00
132_L 176_N 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0309 seconds.