| UniProt: | P0ABX2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14267 | ||
| Length: | 134 (134) | ||
| Sequences: | 775 | ||
| Seq/Len: | 5.78 |
| FLGC
Paralog alert: 0.12 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 97_D | 100_G | 3.109 | 1.00 | |
| 76_L | 92_K | 2.996 | 1.00 | |
| 76_L | 86_D | 2.94 | 1.00 | |
| 128_K | 131_T | 2.815 | 1.00 | |
| 23_V | 47_V | 2.723 | 1.00 | |
| 78_Y | 90_Y | 2.373 | 1.00 | |
| 43_R | 74_D | 2.307 | 1.00 | |
| 34_V | 84_L | 2.164 | 1.00 | |
| 74_D | 92_K | 2.135 | 1.00 | |
| 10_A | 118_V | 2.058 | 1.00 | |
| 28_L | 98_V | 1.931 | 1.00 | |
| 35_T | 84_L | 1.887 | 1.00 | |
| 41_P | 74_D | 1.766 | 1.00 | |
| 21_L | 105_T | 1.702 | 1.00 | |
| 26_S | 45_K | 1.697 | 1.00 | |
| 86_D | 92_K | 1.687 | 1.00 | |
| 19_Q | 67_V | 1.654 | 1.00 | |
| 13_A | 28_L | 1.622 | 0.99 | |
| 10_A | 13_A | 1.62 | 0.99 | |
| 131_T | 134_Q | 1.598 | 0.99 | |
| 17_Q | 20_R | 1.536 | 0.99 | |
| 117_E | 120_N | 1.535 | 0.99 | |
| 17_Q | 107_S | 1.531 | 0.99 | |
| 24_A | 105_T | 1.523 | 0.99 | |
| 50_Q | 63_K | 1.505 | 0.99 | |
| 79_E | 93_M | 1.462 | 0.99 | |
| 112_Y | 129_T | 1.446 | 0.99 | |
| 76_L | 90_Y | 1.432 | 0.98 | |
| 50_Q | 65_A | 1.379 | 0.98 | |
| 46_Q | 104_N | 1.349 | 0.97 | |
| 76_L | 88_K | 1.343 | 0.97 | |
| 17_Q | 111_S | 1.328 | 0.97 | |
| 109_S | 121_T | 1.301 | 0.97 | |
| 125_M | 129_T | 1.3 | 0.97 | |
| 20_R | 107_S | 1.279 | 0.96 | |
| 77_V | 93_M | 1.243 | 0.95 | |
| 79_E | 82_N | 1.227 | 0.95 | |
| 35_T | 40_Q | 1.201 | 0.94 | |
| 77_V | 103_V | 1.199 | 0.94 | |
| 18_S | 35_T | 1.185 | 0.93 | |
| 17_Q | 32_D | 1.17 | 0.93 | |
| 48_V | 68_I | 1.161 | 0.92 | |
| 11_G | 113_Q | 1.157 | 0.92 | |
| 121_T | 125_M | 1.15 | 0.92 | |
| 9_I | 107_S | 1.143 | 0.92 | |
| 10_A | 119_L | 1.139 | 0.92 | |
| 44_A | 70_S | 1.119 | 0.91 | |
| 102_M | 105_T | 1.095 | 0.89 | |
| 12_S | 61_G | 1.094 | 0.89 | |
| 114_A | 125_M | 1.083 | 0.89 | |
| 45_K | 69_E | 1.074 | 0.88 | |
| 105_T | 119_L | 1.072 | 0.88 | |
| 43_R | 71_Q | 1.07 | 0.88 | |
| 106_M | 122_V | 1.064 | 0.87 | |
| 35_T | 39_G | 1.059 | 0.87 | |
| 3_L | 122_V | 1.045 | 0.86 | |
| 72_A | 100_G | 1.033 | 0.85 | |
| 39_G | 47_V | 1.028 | 0.85 | |
| 34_V | 39_G | 1.028 | 0.85 | |
| 106_M | 133_G | 1.021 | 0.84 | |
| 22_N | 26_S | 1.008 | 0.83 | |
| 113_Q | 131_T | 1.008 | 0.83 | |
| 2_A | 5_N | 1.005 | 0.83 | |
| 41_P | 92_K | 1.002 | 0.83 | |
| 44_A | 101_E | 1.002 | 0.83 | |
| 46_Q | 68_I | 1 | 0.83 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3a69A | 1 | 0.9104 | 99.7 | 0.645 | Contact Map | 0.395 |
| 1ucuA | 1 | 0.791 | 9.1 | 0.949 | Contact Map | 0.22 |
| 1oryB | 1 | 0.4104 | 4.9 | 0.954 | Contact Map | 0.402 |
| 2e1mC | 1 | 0.5597 | 3.8 | 0.957 | Contact Map | 0.127 |
| 1j1tA | 1 | 0.5299 | 3.5 | 0.958 | Contact Map | 0.08 |
| 1w85A | 4 | 0.5373 | 3.1 | 0.959 | Contact Map | 0.243 |
| 2xwgA | 5 | 0.4478 | 1.9 | 0.963 | Contact Map | 0.343 |
| 2qt7A | 2 | 0.3731 | 1.9 | 0.963 | Contact Map | 0.419 |
| 3txsA | 4 | 0.5896 | 1.7 | 0.964 | Contact Map | 0.404 |
| 1qkrA | 2 | 0.5896 | 1.6 | 0.965 | Contact Map | 0.524 |
Sequence Conservation (Image Generated using WebLogo v3)