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OPENSEQ.org

PGSA - RECA
UniProt: P0ABF8 - P0A7G6
Length: 535
Sequences: 303
Seq/Len: 0.60
I_Prob: 0.00

PGSA - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Paralog alert: 0.16 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PGSA
RECA - Protein RecA
Paralog alert: 0.03 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RECA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
97_T 306_A 1.42 0.00
57_N 330_S 1.40 0.00
105_I 252_I 1.37 0.00
79_M 22_F 1.34 0.00
33_F 309_W 1.30 0.00
25_Y 142_I 1.30 0.00
104_I 298_K 1.30 0.00
19_F 224_L 1.24 0.00
48_F 220_A 1.22 0.00
37_L 186_S 1.22 0.00
133_A 279_G 1.19 0.00
165_L 134_A 1.17 0.00
37_L 62_I 1.16 0.00
75_V 238_V 1.16 0.00
42_A 45_S 1.15 0.00
52_L 226_I 1.14 0.00
103_I 131_D 1.14 0.00
16_L 22_F 1.14 0.00
6_P 324_V 1.11 0.00
19_F 290_A 1.11 0.00
17_I 43_T 1.09 0.00
23_V 29_R 1.09 0.00
80_V 41_I 1.09 0.00
170_Q 151_T 1.08 0.00
6_P 284_L 1.07 0.00
122_A 206_N 1.07 0.00
82_V 258_Q 1.07 0.00
105_I 230_G 1.06 0.00
159_V 159_E 1.06 0.00
33_F 316_T 1.06 0.00
106_S 117_C 1.05 0.00
106_S 182_N 1.04 0.00
167_S 179_L 1.04 0.00
52_L 222_V 1.04 0.00
134_Q 115_L 1.03 0.00
105_I 232_V 1.03 0.00
105_I 200_I 1.01 0.00
69_V 132_A 1.01 0.00
143_W 66_Y 1.00 0.00
134_Q 91_C 1.00 0.00
12_F 59_M 1.00 0.00
111_W 306_A 1.00 0.00
154_I 222_V 1.00 0.00
11_L 236_E 1.00 0.00
112_M 131_D 0.99 0.00
110_E 76_L 0.98 0.00
48_F 144_V 0.98 0.00
59_S 32_E 0.97 0.00
116_G 137_G 0.97 0.00
15_I 320_I 0.97 0.00
164_T 116_L 0.97 0.00
137_A 81_I 0.96 0.00
57_N 290_A 0.96 0.00
104_I 279_G 0.95 0.00
153_G 107_K 0.95 0.00
152_A 330_S 0.95 0.00
61_R 245_V 0.94 0.00
19_F 130_C 0.94 0.00
160_A 265_Y 0.94 0.00
121_V 186_S 0.94 0.00
93_L 131_D 0.93 0.00
83_T 293_S 0.93 0.00
159_V 134_A 0.93 0.00
6_P 65_I 0.93 0.00
44_V 91_C 0.92 0.00
21_V 144_V 0.92 0.00
3_F 285_I 0.91 0.00
102_E 156_I 0.91 0.00
86_Y 285_I 0.91 0.00
24_F 296_G 0.90 0.00
66_L 38_V 0.90 0.00
168_M 143_V 0.90 0.00
144_R 214_N 0.90 0.00
34_A 237_N 0.89 0.00
38_I 276_V 0.89 0.00
174_A 29_R 0.89 0.00
108_L 298_K 0.89 0.00
48_F 65_I 0.88 0.00
66_L 135_R 0.88 0.00
122_A 253_A 0.88 0.00
161_A 46_L 0.88 0.00
162_V 26_S 0.88 0.00
107_A 307_T 0.88 0.00
33_F 275_L 0.88 0.00
27_P 116_L 0.88 0.00
132_T 327_L 0.88 0.00
110_E 196_I 0.87 0.00
123_V 198_M 0.87 0.00
110_E 230_G 0.87 0.00
59_S 15_L 0.87 0.00
121_V 43_T 0.86 0.00
47_W 292_Y 0.86 0.00
110_E 84_A 0.86 0.00
181_D 299_I 0.86 0.00
176_R 42_S 0.86 0.00
156_L 27_I 0.86 0.00
138_L 288_A 0.86 0.00
126_I 131_D 0.86 0.00
57_N 318_K 0.86 0.00
122_A 114_N 0.86 0.00
12_F 280_V 0.85 0.00
82_V 292_Y 0.85 0.00
52_L 200_I 0.85 0.00
43_A 38_V 0.85 0.00
18_P 18_I 0.85 0.00
48_F 288_A 0.85 0.00
155_A 42_S 0.84 0.00
166_W 62_I 0.84 0.00
134_Q 219_Y 0.84 0.00
155_A 157_E 0.84 0.00
174_A 151_T 0.84 0.00
102_E 122_T 0.84 0.00
176_R 267_E 0.84 0.00
147_I 285_I 0.84 0.00
172_L 220_A 0.84 0.00
161_A 103_I 0.83 0.00
113_A 81_I 0.83 0.00
174_A 134_A 0.83 0.00
165_L 159_E 0.83 0.00
80_V 219_Y 0.83 0.00
9_L 272_Y 0.83 0.00
161_A 220_A 0.83 0.00
21_V 288_A 0.83 0.00
142_L 265_Y 0.82 0.00
97_T 290_A 0.82 0.00
42_A 305_N 0.82 0.00
106_S 164_H 0.82 0.00
5_I 139_V 0.82 0.00
48_F 322_K 0.82 0.00
158_F 90_T 0.82 0.00
38_I 267_E 0.81 0.00
113_A 153_K 0.81 0.00
42_A 160_I 0.81 0.00
120_S 226_I 0.81 0.00
55_R 32_E 0.81 0.00
78_A 232_V 0.81 0.00
55_R 30_L 0.80 0.00
110_E 39_E 0.80 0.00
47_W 274_E 0.80 0.00
11_L 228_R 0.80 0.00
106_S 160_I 0.80 0.00
105_I 225_D 0.80 0.00
106_S 79_Q 0.80 0.00
113_A 135_R 0.79 0.00
55_R 13_A 0.79 0.00
15_I 306_A 0.79 0.00
69_V 214_N 0.79 0.00
5_I 94_I 0.79 0.00
31_S 63_V 0.79 0.00
135_M 299_I 0.79 0.00
41_V 285_I 0.79 0.00
176_R 107_K 0.79 0.00
135_M 322_K 0.78 0.00
44_V 86_R 0.78 0.00
25_Y 244_R 0.78 0.00
6_P 142_I 0.78 0.00
24_F 34_R 0.78 0.00
62_F 5_E 0.78 0.00
42_A 219_Y 0.78 0.00
20_F 10_A 0.78 0.00
68_P 287_K 0.77 0.00
41_V 45_S 0.77 0.00
113_A 220_A 0.77 0.00
136_V 12_A 0.77 0.00
174_A 200_I 0.76 0.00
36_A 188_T 0.76 0.00
29_T 271_F 0.76 0.00
83_T 183_L 0.76 0.00
85_H 6_N 0.76 0.00
149_V 111_D 0.76 0.00
4_N 219_Y 0.76 0.00
57_N 306_A 0.76 0.00
168_M 92_A 0.76 0.00
77_I 6_N 0.76 0.00
140_W 271_F 0.76 0.00
135_M 324_V 0.75 0.00
20_F 260_E 0.75 0.00
178_D 176_M 0.75 0.00
102_E 174_Q 0.75 0.00
21_V 157_E 0.75 0.00
48_F 290_A 0.75 0.00
51_F 17_Q 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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