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OPENSEQ.org
PGSA - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
UniProt: P0ABF8 Sequence
 Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG10706
Length: 182 (179)
Sequences: 1987
Seq/Len: 11.10
PGSA
Paralog alert: 0.16 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
62_F 66_L 2.85 1.00
9_L 45_T 2.721 1.00
52_L 56_W 2.627 1.00
4_N 60_T 2.582 1.00
124_S 170_Q 2.41 1.00
83_T 92_T 2.21 1.00
23_V 38_I 2.182 1.00
21_V 81_L 2.18 1.00
133_A 163_L 2.161 1.00
17_I 73_V 2.093 1.00
20_F 78_A 2.092 1.00
104_I 172_L 2.083 1.00
43_A 135_M 2.028 1.00
126_I 166_W 2.006 1.00
40_C 139_A 1.931 1.00
132_T 136_V 1.885 1.00
51_F 55_R 1.882 1.00
59_S 64_A 1.86 1.00
169_L 173_S 1.85 1.00
16_L 38_I 1.827 1.00
98_M 164_T 1.793 1.00
44_V 47_W 1.707 1.00
14_V 70_A 1.665 1.00
4_N 58_Q 1.657 1.00
125_W 129_V 1.641 1.00
134_Q 164_T 1.639 1.00
61_R 64_A 1.621 1.00
21_V 77_I 1.617 1.00
112_M 121_V 1.563 1.00
8_L 12_F 1.546 1.00
105_I 172_L 1.539 1.00
137_A 160_A 1.536 1.00
32_P 87_H 1.519 1.00
141_L 153_G 1.498 1.00
109_R 130_K 1.49 1.00
11_L 15_I 1.479 1.00
91_V 161_A 1.478 1.00
140_W 156_L 1.468 1.00
23_V 34_A 1.465 1.00
133_A 159_V 1.424 1.00
3_F 11_L 1.415 1.00
164_T 168_M 1.37 0.99
9_L 48_F 1.352 0.99
16_L 41_V 1.348 0.99
173_S 176_R 1.347 0.99
44_V 48_F 1.33 0.99
3_F 8_L 1.323 0.99
42_A 74_L 1.303 0.99
83_T 89_W 1.301 0.99
33_F 37_L 1.289 0.99
170_Q 174_A 1.253 0.99
36_A 139_A 1.226 0.98
16_L 19_F 1.224 0.98
12_F 45_T 1.2 0.98
148_W 151_Y 1.195 0.98
165_L 169_L 1.186 0.98
76_A 80_V 1.185 0.98
24_F 81_L 1.18 0.98
5_I 8_L 1.179 0.98
93_L 100_A 1.174 0.98
19_F 23_V 1.161 0.97
37_L 41_V 1.149 0.97
20_F 38_I 1.136 0.97
75_V 138_L 1.117 0.96
129_V 163_L 1.116 0.96
107_A 111_W 1.115 0.96
126_I 170_Q 1.114 0.96
91_V 158_F 1.108 0.96
75_V 79_M 1.097 0.96
137_A 157_F 1.097 0.96
10_T 66_L 1.097 0.96
131_T 135_M 1.096 0.96
24_F 85_H 1.094 0.96
8_L 11_L 1.092 0.96
6_P 58_Q 1.087 0.96
162_V 166_W 1.086 0.96
79_M 137_A 1.078 0.95
33_F 143_W 1.06 0.95
97_T 165_L 1.049 0.94
127_G 167_S 1.048 0.94
129_V 132_T 1.048 0.94
78_A 138_L 1.047 0.94
39_F 74_L 1.042 0.94
47_W 51_F 1.032 0.94
6_P 52_L 1.03 0.94
82_V 87_H 1.021 0.93
40_C 136_V 1.021 0.93
6_P 9_L 1.02 0.93
9_L 44_V 1.016 0.93
79_M 134_Q 1.015 0.93
141_L 157_F 1.011 0.93
9_L 47_W 1.01 0.93
14_V 66_L 1.003 0.93
77_I 81_L 1.002 0.92
102_E 106_S 1.001 0.92
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
2yzcA80.30771.80.962Contact Map0.059
3j08A20.34071.70.963Contact Map0.023
2kesA10.12641.60.963Contact Map0.666
2m8fA10.11541.20.966Contact Map0.239
3oglQ70.115410.968Contact Map0.138
3m73A10.36810.90.968Contact Map0.094
3arcJ20.20880.90.968Contact Map0.156
1vryA10.34070.90.968Contact Map0.438
3rr6A10.32970.80.969Contact Map0.413
1unaA20.23630.70.97Contact Map0
Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.
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