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OPENSEQ.org

PGSA - PNCC
UniProt: P0ABF8 - P0A6G3
Length: 347
Sequences: 395
Seq/Len: 1.20
I_Prob: 0.00

PGSA - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Paralog alert: 0.16 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PGSA
PNCC - Nicotinamide-nucleotide amidohydrolase PncC
Paralog alert: 0.30 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PNCC YDEJ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
153_G 32_G 1.14 0.00
59_S 54_V 1.13 0.00
52_L 119_T 1.07 0.00
168_M 51_R 1.02 0.00
102_E 140_G 1.01 0.00
106_S 99_A 0.99 0.00
155_A 24_V 0.98 0.00
136_V 128_R 0.98 0.00
99_I 121_W 0.98 0.00
105_I 124_F 0.97 0.00
169_L 19_A 0.94 0.00
156_L 90_A 0.90 0.00
29_T 52_G 0.90 0.00
38_I 144_A 0.90 0.00
19_F 117_V 0.85 0.00
56_W 99_A 0.85 0.00
62_F 37_K 0.84 0.00
161_A 41_D 0.84 0.00
106_S 105_I 0.84 0.00
9_L 37_K 0.84 0.00
91_V 101_S 0.84 0.00
9_L 17_L 0.83 0.00
100_A 101_S 0.83 0.00
59_S 22_A 0.83 0.00
102_E 146_R 0.82 0.00
11_L 119_T 0.81 0.00
48_F 74_Q 0.80 0.00
41_V 95_R 0.80 0.00
113_A 105_I 0.80 0.00
40_C 122_F 0.80 0.00
81_L 64_M 0.79 0.00
9_L 141_D 0.79 0.00
40_C 20_R 0.78 0.00
92_T 67_V 0.78 0.00
159_V 24_V 0.78 0.00
156_L 70_E 0.78 0.00
178_D 161_F 0.78 0.00
36_A 113_E 0.77 0.00
91_V 137_C 0.77 0.00
3_F 158_W 0.77 0.00
108_L 125_A 0.77 0.00
55_R 121_W 0.77 0.00
91_V 95_R 0.77 0.00
103_I 77_A 0.77 0.00
59_S 68_R 0.76 0.00
169_L 66_G 0.76 0.00
87_H 100_V 0.76 0.00
5_I 133_T 0.75 0.00
156_L 150_T 0.75 0.00
57_N 101_S 0.75 0.00
147_I 149_A 0.75 0.00
97_T 139_S 0.75 0.00
140_W 138_F 0.74 0.00
81_L 32_G 0.73 0.00
66_L 77_A 0.73 0.00
136_V 24_V 0.73 0.00
15_I 150_T 0.73 0.00
74_L 149_A 0.72 0.00
97_T 127_A 0.72 0.00
136_V 12_Q 0.72 0.00
23_V 11_E 0.72 0.00
6_P 24_V 0.72 0.00
69_V 58_N 0.72 0.00
140_W 62_A 0.71 0.00
139_A 39_I 0.71 0.00
98_M 105_I 0.71 0.00
162_V 36_A 0.71 0.00
99_I 71_T 0.71 0.00
158_F 113_E 0.71 0.00
77_I 40_T 0.71 0.00
163_L 157_L 0.71 0.00
136_V 60_A 0.71 0.00
52_L 17_L 0.71 0.00
55_R 38_V 0.71 0.00
85_H 122_F 0.70 0.00
60_T 121_W 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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