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ATPA - ATPL
UniProt: P0ABB0 - P68699
Length: 592
Sequences: 852
Seq/Len: 1.48
I_Prob: 0.08

ATPA - ATP synthase subunit alpha
Paralog alert: 0.61 [within 20: 0.32] - ratio of genomes with paralogs
Cluster includes: ATPA ATPB FLII
ATPL - ATP synthase subunit c
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
421_L 74_V 1.44 0.08
379_G 42_Q 1.19 0.04
121_L 25_A 1.14 0.03
368_V 46_I 1.13 0.03
196_V 41_R 1.12 0.03
194_I 46_I 1.11 0.03
132_I 42_Q 1.02 0.02
4_N 45_L 1.01 0.02
248_Y 40_A 1.00 0.02
58_N 11_M 0.94 0.02
224_V 26_I 0.94 0.02
248_Y 16_M 0.93 0.02
459_V 15_V 0.93 0.02
372_I 22_I 0.92 0.02
223_V 14_A 0.91 0.02
266_Q 40_A 0.91 0.01
256_A 36_L 0.90 0.01
398_A 26_I 0.88 0.01
304_V 56_V 0.87 0.01
202_A 40_A 0.87 0.01
53_I 27_G 0.86 0.01
266_Q 66_I 0.85 0.01
250_R 65_M 0.84 0.01
216_G 73_Y 0.83 0.01
129_V 38_G 0.83 0.01
481_P 55_I 0.82 0.01
228_A 41_R 0.82 0.01
211_K 19_L 0.81 0.01
340_F 35_F 0.80 0.01
38_V 33_G 0.79 0.01
394_R 18_G 0.78 0.01
176_T 39_A 0.78 0.01
27_N 12_A 0.78 0.01
36_D 41_R 0.78 0.01
119_G 27_G 0.77 0.01
161_R 40_A 0.76 0.01
76_M 20_A 0.76 0.01
249_F 42_Q 0.76 0.01
207_N 68_V 0.76 0.01
207_N 42_Q 0.75 0.01
136_V 35_F 0.75 0.01
182_A 18_G 0.73 0.01
415_D 15_V 0.73 0.01
401_R 41_R 0.72 0.01
266_Q 62_A 0.71 0.01
76_M 50_R 0.71 0.01
320_K 61_D 0.71 0.01
242_G 41_R 0.71 0.01
259_I 55_I 0.71 0.01
19_F 63_I 0.70 0.01
222_I 68_V 0.70 0.01
307_E 69_G 0.70 0.01
264_S 38_G 0.70 0.01
458_D 26_I 0.70 0.01
266_Q 63_I 0.69 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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