| UniProt: | P68699 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10102 | ||
| Length: | 79 (73) | ||
| Sequences: | 835 | ||
| Seq/Len: | 11.44 |
| ATPL
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 34_K | 37_E | 4.23 | 1.00 | |
| 32_G | 56_V | 3.376 | 1.00 | |
| 35_F | 49_L | 2.548 | 1.00 | |
| 46_I | 50_R | 2.111 | 1.00 | |
| 32_G | 57_M | 1.778 | 1.00 | |
| 26_I | 30_I | 1.751 | 1.00 | |
| 39_A | 45_L | 1.695 | 1.00 | |
| 39_A | 52_Q | 1.638 | 1.00 | |
| 72_L | 76_F | 1.619 | 1.00 | |
| 23_G | 29_G | 1.563 | 1.00 | |
| 45_L | 49_L | 1.497 | 1.00 | |
| 39_A | 46_I | 1.482 | 1.00 | |
| 23_G | 26_I | 1.448 | 1.00 | |
| 24_A | 64_P | 1.441 | 1.00 | |
| 28_I | 62_A | 1.42 | 1.00 | |
| 55_I | 59_L | 1.402 | 0.99 | |
| 30_I | 34_K | 1.393 | 0.99 | |
| 28_I | 63_I | 1.258 | 0.99 | |
| 28_I | 60_V | 1.248 | 0.99 | |
| 8_L | 11_M | 1.234 | 0.98 | |
| 10_Y | 78_V | 1.21 | 0.98 | |
| 17_M | 67_A | 1.19 | 0.98 | |
| 53_F | 57_M | 1.17 | 0.97 | |
| 62_A | 65_M | 1.142 | 0.97 | |
| 46_I | 51_T | 1.138 | 0.97 | |
| 24_A | 28_I | 1.129 | 0.97 | |
| 57_M | 63_I | 1.121 | 0.97 | |
| 35_F | 53_F | 1.08 | 0.95 | |
| 31_L | 60_V | 1.069 | 0.95 | |
| 23_G | 27_G | 1.064 | 0.95 | |
| 22_I | 42_Q | 1.054 | 0.95 | |
| 63_I | 68_V | 1.044 | 0.94 | |
| 69_G | 72_L | 1.042 | 0.94 | |
| 30_I | 33_G | 1.04 | 0.94 | |
| 41_R | 44_D | 1.028 | 0.94 | |
| 36_L | 52_Q | 1.013 | 0.93 | |
| 9_L | 78_V | 1.011 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1a91A | 1 | 1 | 99.8 | 0.167 | Contact Map | 0.236 |
| 2xquA | 5 | 1 | 99.7 | 0.212 | Contact Map | 0.731 |
| 3zk1A | 22 | 0.9873 | 99.7 | 0.235 | Contact Map | 0.747 |
| 1wu0A | 1 | 0.9114 | 99.7 | 0.27 | Contact Map | 0.277 |
| 2x2vA | 13 | 0.8734 | 99.7 | 0.27 | Contact Map | 0.756 |
| 4f4sA | 10 | 0.962 | 99.6 | 0.28 | Contact Map | 0.722 |
| 2xndJ | 8 | 0.9114 | 99.6 | 0.3 | Contact Map | 0.423 |
| 2bl2A | 10 | 0.9367 | 99.4 | 0.37 | Contact Map | 0.567 |
| 4g1uA | 2 | 0.8987 | 1.7 | 0.925 | Contact Map | 0.288 |
| 2l16A | 1 | 0.3291 | 1.6 | 0.926 | Contact Map | 0.126 |
Sequence Conservation (Image Generated using WebLogo v3)