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OPENSEQ.org

YBGJ - YBGL
UniProt: P0AAV4 - P75746
Length: 462
Sequences: 744
Seq/Len: 1.63
I_Prob: 0.59

YBGJ - Uncharacterized protein YbgJ
Paralog alert: 0.24 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YBGJ
YBGL - UPF0271 protein YbgL
Paralog alert: 0.09 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YBGL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
173_Y 110_Y 1.66 0.59
179_G 110_Y 1.53 0.48
132_F 216_C 1.38 0.36
132_F 158_E 1.31 0.30
17_E 190_Q 1.19 0.21
132_F 104_K 1.19 0.21
173_Y 104_K 1.12 0.17
117_V 86_I 1.11 0.16
164_G 110_Y 1.08 0.15
164_G 23_V 1.08 0.15
150_R 174_R 1.02 0.12
54_T 217_L 1.01 0.12
132_F 110_Y 0.99 0.11
181_W 174_R 0.99 0.10
132_F 160_F 0.90 0.07
130_L 202_S 0.90 0.07
71_L 116_E 0.90 0.07
173_Y 216_C 0.90 0.07
88_I 200_V 0.89 0.07
179_G 105_P 0.88 0.07
150_R 163_R 0.88 0.07
89_E 200_V 0.87 0.07
11_E 137_V 0.86 0.06
173_Y 160_F 0.85 0.06
173_Y 158_E 0.85 0.06
110_G 37_A 0.85 0.06
181_W 163_R 0.85 0.06
118_E 243_A 0.85 0.06
17_E 214_T 0.82 0.05
206_D 57_H 0.82 0.05
45_E 71_M 0.82 0.05
92_V 32_F 0.81 0.05
49_G 7_A 0.80 0.05
196_R 51_G 0.80 0.05
179_G 104_K 0.79 0.04
129_F 124_A 0.78 0.04
109_C 39_I 0.78 0.04
152_A 242_V 0.78 0.04
122_S 154_T 0.77 0.04
174_P 110_Y 0.77 0.04
112_S 208_A 0.77 0.04
199_P 97_G 0.76 0.04
51_N 65_N 0.76 0.04
50_M 78_V 0.76 0.04
107_A 189_A 0.76 0.04
46_A 201_K 0.76 0.04
130_L 102_H 0.75 0.04
15_V 148_G 0.75 0.04
173_Y 105_P 0.75 0.04
139_L 76_E 0.74 0.04
192_F 161_A 0.74 0.04
192_F 180_L 0.74 0.04
45_E 3_I 0.73 0.04
183_L 97_G 0.73 0.04
69_E 50_N 0.73 0.04
177_T 110_Y 0.73 0.04
200_I 214_T 0.73 0.03
193_D 148_G 0.72 0.03
166_G 91_T 0.72 0.03
206_D 140_A 0.72 0.03
192_F 190_Q 0.72 0.03
150_R 111_N 0.72 0.03
174_P 105_P 0.71 0.03
116_V 168_D 0.71 0.03
133_Q 102_H 0.71 0.03
129_F 9_L 0.71 0.03
204_P 202_S 0.70 0.03
122_S 77_T 0.70 0.03
58_R 194_M 0.70 0.03
191_L 148_G 0.70 0.03
77_E 28_I 0.70 0.03
12_T 195_V 0.70 0.03
149_P 204_T 0.69 0.03
123_V 116_E 0.69 0.03
209_R 82_T 0.69 0.03
172_V 109_L 0.69 0.03
90_I 230_R 0.69 0.03
181_W 111_N 0.69 0.03
57_L 210_V 0.69 0.03
130_L 9_L 0.69 0.03
129_F 113_A 0.69 0.03
146_L 142_S 0.69 0.03
194_P 202_S 0.68 0.03
136_F 110_Y 0.68 0.03
199_P 35_G 0.68 0.03
10_G 97_G 0.68 0.03
86_R 51_G 0.67 0.03
204_P 116_E 0.67 0.03
9_I 102_H 0.67 0.03
8_L 20_L 0.67 0.03
161_G 30_C 0.67 0.03
88_I 110_Y 0.67 0.03
138_Y 108_M 0.67 0.03
183_L 153_L 0.66 0.03
184_I 174_R 0.66 0.03
171_G 4_D 0.66 0.02
49_G 113_A 0.66 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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