May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FABF - RL32
UniProt: P0AAI5 - P0A7N4
Length: 470
Sequences: 332
Seq/Len: 0.71
I_Prob: 0.00

FABF - 3-oxoacyl-[acyl-carrier-protein] synthase 2
Paralog alert: 0.57 [within 20: 0.26] - ratio of genomes with paralogs
Cluster includes: FABB FABF
RL32 - 50S ribosomal protein L32
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL32
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
351_S 7_K 1.51 0.00
17_V 50_R 1.33 0.00
186_M 2_A 1.06 0.00
195_S 31_D 0.97 0.00
125_G 7_K 0.93 0.00
348_A 10_R 0.92 0.00
143_V 4_Q 0.92 0.00
59_C 9_T 0.92 0.00
76_Q 10_R 0.91 0.00
375_G 3_V 0.90 0.00
325_E 26_T 0.88 0.00
372_P 21_A 0.87 0.00
383_H 10_R 0.87 0.00
39_D 32_K 0.86 0.00
169_H 35_G 0.85 0.00
194_A 9_T 0.85 0.00
345_A 31_D 0.84 0.00
137_S 44_T 0.82 0.00
109_I 17_R 0.81 0.00
14_L 52_R 0.81 0.00
68_Q 52_R 0.81 0.00
138_T 44_T 0.81 0.00
103_A 9_T 0.80 0.00
253_K 23_T 0.80 0.00
13_M 55_I 0.80 0.00
137_S 34_S 0.80 0.00
369_L 54_V 0.80 0.00
212_R 13_R 0.79 0.00
295_A 7_K 0.79 0.00
107_S 54_V 0.79 0.00
339_T 57_K 0.78 0.00
130_I 29_S 0.77 0.00
62_I 12_K 0.77 0.00
331_L 12_K 0.76 0.00
105_I 14_G 0.76 0.00
8_V 45_A 0.75 0.00
264_S 19_H 0.75 0.00
39_D 34_S 0.75 0.00
207_R 27_S 0.75 0.00
122_L 52_R 0.74 0.00
352_I 46_D 0.74 0.00
58_N 39_L 0.73 0.00
68_Q 50_R 0.73 0.00
48_T 39_L 0.73 0.00
399_F 52_R 0.73 0.00
374_E 31_D 0.73 0.00
396_C 7_K 0.72 0.00
105_I 56_A 0.72 0.00
201_G 43_I 0.72 0.00
30_A 5_Q 0.72 0.00
359_R 9_T 0.72 0.00
144_A 44_T 0.72 0.00
69_R 5_Q 0.71 0.00
24_T 10_R 0.71 0.00
258_L 8_P 0.71 0.00
408_L 27_S 0.71 0.00
11_L 12_K 0.71 0.00
373_D 5_Q 0.71 0.00
399_F 50_R 0.70 0.00
188_A 54_V 0.70 0.00
112_L 19_H 0.70 0.00
328_S 52_R 0.70 0.00
243_E 29_S 0.69 0.00
199_G 5_Q 0.69 0.00
166_S 23_T 0.68 0.00
161_A 32_K 0.68 0.00
144_A 48_Y 0.68 0.00
316_A 26_T 0.68 0.00
170_N 29_S 0.67 0.00
264_S 40_R 0.67 0.00
379_D 33_T 0.67 0.00
44_S 32_K 0.67 0.00
381_V 16_R 0.66 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0091 seconds.