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OPENSEQ.org

PTSO - YHBJ
UniProt: P0A9N0 - P0A894
Length: 374
Sequences: 332
Seq/Len: 0.90
I_Prob: 0.00

PTSO - Phosphocarrier protein NPr
Paralog alert: 0.51 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: PTHP PTSO
YHBJ - UPF0042 nucleotide-binding protein YhbJ
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YHBJ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
45_E 236_N 1.31 0.00
35_L 96_Y 1.29 0.00
30_F 16_V 1.25 0.00
30_F 139_M 1.23 0.00
67_A 118_K 1.23 0.00
13_L 27_Y 1.21 0.00
27_M 98_D 1.13 0.00
34_V 96_Y 1.13 0.00
83_F 135_D 1.13 0.00
26_L 29_V 1.12 0.00
7_V 29_V 1.12 0.00
9_I 96_Y 1.10 0.00
34_V 183_V 1.09 0.00
3_V 26_F 1.08 0.00
23_L 251_K 1.08 0.00
65_V 41_A 1.08 0.00
73_E 55_I 1.07 0.00
12_K 53_V 1.07 0.00
44_A 81_Q 1.07 0.00
83_F 169_F 1.06 0.00
5_Q 173_I 1.04 0.00
34_V 168_G 1.04 0.00
15_M 244_A 1.04 0.00
30_F 36_L 1.02 0.00
54_M 27_Y 1.02 0.00
46_A 177_A 1.01 0.00
19_P 218_F 1.01 0.00
68_T 193_P 1.01 0.00
15_M 177_A 1.01 0.00
28_Q 6_V 1.00 0.00
43_E 37_L 0.99 0.00
76_L 230_L 0.98 0.00
51_A 40_L 0.98 0.00
50_I 32_L 0.98 0.00
53_L 9_R 0.98 0.00
30_F 157_E 0.98 0.00
40_E 34_V 0.97 0.00
72_E 176_D 0.97 0.00
57_S 275_R 0.96 0.00
23_L 111_S 0.96 0.00
51_A 236_N 0.96 0.00
8_E 37_L 0.96 0.00
82_L 102_L 0.96 0.00
65_V 196_R 0.96 0.00
51_A 9_R 0.95 0.00
24_F 87_A 0.95 0.00
73_E 203_K 0.94 0.00
79_V 159_E 0.93 0.00
63_I 135_D 0.92 0.00
63_I 123_L 0.92 0.00
40_E 193_P 0.92 0.00
32_A 173_I 0.91 0.00
14_G 244_A 0.90 0.00
9_I 19_R 0.90 0.00
51_A 237_N 0.90 0.00
54_M 279_L 0.90 0.00
45_E 84_F 0.89 0.00
4_K 114_S 0.89 0.00
16_H 140_S 0.89 0.00
50_I 173_I 0.88 0.00
36_L 40_L 0.88 0.00
31_D 6_V 0.88 0.00
6_T 243_V 0.88 0.00
10_T 96_Y 0.88 0.00
9_I 99_T 0.88 0.00
11_N 102_L 0.88 0.00
26_L 131_D 0.87 0.00
64_E 169_F 0.87 0.00
32_A 156_R 0.87 0.00
36_L 15_S 0.87 0.00
13_L 240_Y 0.86 0.00
44_A 64_P 0.86 0.00
75_A 168_G 0.86 0.00
24_F 71_M 0.86 0.00
45_E 176_D 0.86 0.00
45_E 60_M 0.86 0.00
23_L 70_A 0.86 0.00
52_L 51_A 0.86 0.00
53_L 59_N 0.86 0.00
16_H 242_T 0.86 0.00
88_D 140_S 0.86 0.00
20_A 151_R 0.85 0.00
3_V 74_L 0.85 0.00
54_M 132_L 0.85 0.00
75_A 183_V 0.85 0.00
75_A 14_K 0.85 0.00
88_D 183_V 0.85 0.00
7_V 204_P 0.85 0.00
53_L 169_F 0.85 0.00
56_D 112_L 0.84 0.00
49_V 236_N 0.84 0.00
51_A 225_Y 0.84 0.00
38_N 235_T 0.83 0.00
57_S 279_L 0.83 0.00
34_V 9_R 0.83 0.00
27_M 110_L 0.83 0.00
45_E 120_S 0.83 0.00
32_A 193_P 0.83 0.00
53_L 191_W 0.83 0.00
15_M 24_M 0.83 0.00
80_I 2_V 0.82 0.00
44_A 32_L 0.82 0.00
44_A 191_W 0.82 0.00
52_L 60_M 0.82 0.00
14_G 177_A 0.82 0.00
52_L 6_V 0.82 0.00
21_M 237_N 0.82 0.00
16_H 125_P 0.82 0.00
79_V 57_V 0.82 0.00
47_N 14_K 0.81 0.00
88_D 71_M 0.81 0.00
82_L 281_K 0.81 0.00
54_M 240_Y 0.81 0.00
53_L 97_S 0.81 0.00
24_F 40_L 0.81 0.00
45_E 9_R 0.81 0.00
36_L 264_Y 0.80 0.00
67_A 38_P 0.80 0.00
13_L 212_H 0.80 0.00
13_L 177_A 0.80 0.00
50_I 81_Q 0.80 0.00
50_I 145_A 0.80 0.00
48_S 98_D 0.80 0.00
25_E 120_S 0.79 0.00
21_M 278_T 0.79 0.00
34_V 169_F 0.79 0.00
65_V 69_Q 0.79 0.00
16_H 229_W 0.79 0.00
48_S 94_R 0.79 0.00
59_K 29_V 0.79 0.00
9_I 149_R 0.79 0.00
79_V 41_A 0.78 0.00
82_L 257_I 0.78 0.00
51_A 241_L 0.78 0.00
23_L 139_M 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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