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OPENSEQ.org

PPIC - RHLB
UniProt: P0A9L5 - P0A8J8
Length: 514
Sequences: 430
Seq/Len: 0.93
I_Prob: 0.00

PPIC - Peptidyl-prolyl cis-trans isomerase C
Paralog alert: 0.67 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: PPIC
RHLB - ATP-dependent RNA helicase RhlB
Paralog alert: 0.90 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: DBPA DEAD RHLB RHLE SRMB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
74_P 154_I 1.39 0.00
36_K 97_A 1.21 0.00
34_L 137_I 1.13 0.00
80_T 298_I 1.04 0.00
56_G 139_I 1.03 0.00
86_I 322_I 1.01 0.00
18_A 131_L 0.92 0.00
74_P 115_L 0.92 0.00
17_L 123_G 0.88 0.00
80_T 39_A 0.87 0.00
88_K 247_L 0.87 0.00
23_E 34_P 0.87 0.00
74_P 44_L 0.87 0.00
29_A 132_E 0.86 0.00
86_I 45_A 0.85 0.00
12_V 138_L 0.85 0.00
37_K 31_N 0.84 0.00
28_G 356_S 0.83 0.00
25_I 38_L 0.83 0.00
4_T 277_A 0.83 0.00
43_S 132_E 0.82 0.00
10_I 317_A 0.81 0.00
8_L 88_L 0.80 0.00
66_V 138_L 0.79 0.00
61_A 183_F 0.79 0.00
64_K 149_A 0.77 0.00
86_I 213_M 0.76 0.00
10_I 68_F 0.76 0.00
60_P 219_I 0.75 0.00
10_I 54_Q 0.75 0.00
19_L 311_V 0.74 0.00
43_S 135_V 0.74 0.00
41_C 324_A 0.74 0.00
85_H 156_L 0.73 0.00
19_L 329_F 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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