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OPENSEQ.org

TOLB - TOLQ
UniProt: P0A855 - P0ABU9
Length: 660
Sequences: 447
Seq/Len: 0.70
I_Prob: 0.01

TOLB - Protein TolB
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: TOLB
TOLQ - Protein TolQ
Paralog alert: 0.78 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: EXBB TOLQ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
58_V 140_I 1.56 0.01
347_V 38_R 1.55 0.01
209_P 134_G 1.49 0.01
382_L 38_R 1.44 0.00
231_L 116_M 1.44 0.00
181_E 157_G 1.42 0.00
170_V 140_I 1.38 0.00
386_G 184_A 1.25 0.00
302_L 67_Q 1.20 0.00
222_G 210_M 1.20 0.00
340_S 38_R 1.19 0.00
346_M 155_A 1.19 0.00
409_R 172_A 1.19 0.00
231_L 4_M 1.18 0.00
151_E 157_G 1.16 0.00
46_G 25_I 1.15 0.00
43_Q 140_I 1.15 0.00
25_I 216_I 1.14 0.00
239_V 103_A 1.12 0.00
327_I 180_I 1.11 0.00
72_D 151_H 1.11 0.00
224_S 216_I 1.10 0.00
228_I 163_T 1.10 0.00
415_P 38_R 1.09 0.00
230_T 176_I 1.08 0.00
295_W 87_F 1.08 0.00
227_V 31_S 1.08 0.00
201_P 139_Y 1.08 0.00
58_V 82_I 1.07 0.00
214_L 110_R 1.07 0.00
262_L 176_I 1.07 0.00
170_V 172_A 1.05 0.00
34_G 157_G 1.05 0.00
292_E 86_G 1.05 0.00
234_G 124_E 1.05 0.00
374_T 37_Q 1.05 0.00
226_L 152_A 1.05 0.00
167_I 7_L 1.04 0.00
91_W 135_S 1.04 0.00
152_V 97_N 1.04 0.00
425_A 34_I 1.03 0.00
372_S 21_M 1.03 0.00
269_N 172_A 1.03 0.00
251_F 201_K 1.03 0.00
358_I 18_K 1.02 0.00
271_Y 189_V 1.02 0.00
270_L 72_K 1.01 0.00
386_G 164_L 1.01 0.00
51_P 86_G 1.01 0.00
202_L 139_Y 1.00 0.00
224_S 129_F 1.00 0.00
383_A 104_V 1.00 0.00
345_F 191_A 1.00 0.00
121_T 111_A 1.00 0.00
170_V 21_M 1.00 0.00
389_V 151_H 1.00 0.00
198_S 206_Y 0.99 0.00
391_Y 124_E 0.99 0.00
239_V 49_A 0.99 0.00
427_S 136_I 0.99 0.00
210_D 183_F 0.99 0.00
170_V 103_A 0.99 0.00
218_T 131_G 0.99 0.00
135_K 46_A 0.98 0.00
335_Q 131_G 0.98 0.00
95_G 16_L 0.98 0.00
412_A 38_R 0.98 0.00
71_L 35_I 0.97 0.00
163_F 177_A 0.97 0.00
135_K 43_N 0.97 0.00
58_V 116_M 0.96 0.00
362_D 137_S 0.96 0.00
98_A 172_A 0.96 0.00
231_L 46_A 0.95 0.00
219_F 196_N 0.95 0.00
288_S 198_R 0.95 0.00
386_G 21_M 0.95 0.00
70_P 200_N 0.95 0.00
283_V 152_A 0.94 0.00
427_S 152_A 0.94 0.00
309_A 115_S 0.94 0.00
327_I 29_I 0.94 0.00
102_G 112_M 0.94 0.00
369_Q 25_I 0.94 0.00
61_D 212_E 0.93 0.00
285_D 196_N 0.93 0.00
290_N 79_S 0.93 0.00
295_W 81_Q 0.93 0.00
146_H 212_E 0.93 0.00
108_P 140_I 0.93 0.00
262_L 134_G 0.93 0.00
248_A 5_N 0.93 0.00
337_A 69_S 0.93 0.00
247_G 139_Y 0.93 0.00
166_R 50_E 0.93 0.00
22_E 95_R 0.92 0.00
202_L 131_G 0.92 0.00
259_A 202_L 0.92 0.00
382_L 14_S 0.92 0.00
30_G 190_M 0.92 0.00
222_G 12_K 0.92 0.00
165_T 62_L 0.91 0.00
404_V 199_V 0.91 0.00
190_Y 44_A 0.91 0.00
199_P 19_L 0.91 0.00
166_R 106_E 0.91 0.00
410_F 139_Y 0.90 0.00
46_G 92_R 0.90 0.00
27_I 82_I 0.90 0.00
311_R 202_L 0.90 0.00
91_W 57_W 0.90 0.00
201_P 206_Y 0.90 0.00
45_A 6_I 0.90 0.00
89_A 172_A 0.90 0.00
262_L 165_Q 0.89 0.00
163_F 216_I 0.89 0.00
425_A 11_L 0.89 0.00
422_K 10_F 0.89 0.00
295_W 78_G 0.89 0.00
267_S 180_I 0.89 0.00
399_S 66_Y 0.89 0.00
72_D 211_E 0.89 0.00
260_F 81_Q 0.89 0.00
218_T 20_I 0.89 0.00
196_H 166_M 0.89 0.00
144_A 180_I 0.89 0.00
214_L 157_G 0.89 0.00
422_K 139_Y 0.89 0.00
58_V 101_P 0.89 0.00
29_S 121_E 0.88 0.00
210_D 172_A 0.88 0.00
35_R 203_E 0.88 0.00
185_S 152_A 0.88 0.00
406_T 49_A 0.88 0.00
243_P 82_I 0.88 0.00
163_F 17_V 0.88 0.00
374_T 221_A 0.88 0.00
98_A 6_I 0.88 0.00
377_D 14_S 0.87 0.00
210_D 115_S 0.87 0.00
292_E 139_Y 0.87 0.00
429_Y 198_R 0.87 0.00
382_L 218_H 0.87 0.00
131_Q 38_R 0.87 0.00
95_G 191_A 0.86 0.00
335_Q 136_I 0.86 0.00
378_E 150_M 0.86 0.00
342_D 90_F 0.86 0.00
379_T 131_G 0.86 0.00
27_I 9_L 0.86 0.00
299_S 131_G 0.86 0.00
234_G 101_P 0.86 0.00
418_D 8_D 0.86 0.00
229_Q 14_S 0.86 0.00
154_E 21_M 0.86 0.00
281_R 43_N 0.86 0.00
53_D 133_V 0.86 0.00
234_G 179_A 0.86 0.00
100_V 94_H 0.86 0.00
64_N 114_I 0.86 0.00
379_T 61_E 0.86 0.00
155_K 180_I 0.85 0.00
365_T 166_M 0.85 0.00
80_P 54_D 0.85 0.00
101_V 88_K 0.85 0.00
61_D 116_M 0.84 0.00
217_V 53_E 0.84 0.00
214_L 16_L 0.84 0.00
145_G 112_M 0.84 0.00
170_V 71_G 0.84 0.00
386_G 172_A 0.84 0.00
370_V 215_A 0.84 0.00
248_A 114_I 0.84 0.00
389_V 135_S 0.84 0.00
140_W 111_A 0.84 0.00
295_W 134_G 0.84 0.00
259_A 195_L 0.84 0.00
404_V 14_S 0.84 0.00
334_N 113_R 0.84 0.00
112_Y 195_L 0.84 0.00
104_V 82_I 0.83 0.00
46_G 140_I 0.83 0.00
169_Y 136_I 0.83 0.00
226_L 127_I 0.83 0.00
387_T 172_A 0.83 0.00
70_P 53_E 0.83 0.00
32_D 195_L 0.83 0.00
362_D 80_E 0.83 0.00
404_V 194_R 0.83 0.00
277_S 202_L 0.83 0.00
87_Q 140_I 0.82 0.00
262_L 78_G 0.82 0.00
65_S 66_Y 0.82 0.00
336_D 131_G 0.82 0.00
193_F 72_K 0.82 0.00
322_G 220_Q 0.82 0.00
289_N 173_E 0.82 0.00
91_W 184_A 0.82 0.00
206_A 152_A 0.82 0.00
39_V 50_E 0.82 0.00
299_S 13_A 0.82 0.00
167_I 102_E 0.82 0.00
298_D 165_Q 0.82 0.00
218_T 204_L 0.82 0.00
425_A 17_V 0.82 0.00
361_Q 126_H 0.82 0.00
353_G 55_K 0.82 0.00
168_A 92_R 0.82 0.00
384_P 17_V 0.81 0.00
297_P 221_A 0.81 0.00
108_P 46_A 0.81 0.00
270_L 152_A 0.81 0.00
422_K 64_R 0.81 0.00
269_N 221_A 0.81 0.00
187_Y 111_A 0.81 0.00
214_L 106_E 0.81 0.00
248_A 9_L 0.81 0.00
77_P 136_I 0.81 0.00
163_F 89_E 0.81 0.00
56_G 26_G 0.81 0.00
53_D 29_I 0.81 0.00
124_A 51_A 0.81 0.00
95_G 190_M 0.81 0.00
316_K 139_Y 0.81 0.00
257_K 143_F 0.80 0.00
295_W 120_L 0.80 0.00
38_G 135_S 0.80 0.00
47_P 47_R 0.80 0.00
166_R 3_D 0.80 0.00
219_F 140_I 0.80 0.00
348_M 221_A 0.80 0.00
56_G 34_I 0.80 0.00
165_T 66_Y 0.80 0.00
405_S 211_E 0.80 0.00
412_A 205_N 0.80 0.00
230_T 202_L 0.80 0.00
328_T 47_R 0.80 0.00
335_Q 152_A 0.80 0.00
158_G 169_P 0.80 0.00
202_L 220_Q 0.80 0.00
379_T 65_L 0.80 0.00
271_Y 183_F 0.80 0.00
301_N 139_Y 0.80 0.00
25_I 93_L 0.80 0.00
96_I 122_N 0.80 0.00
42_F 58_S 0.79 0.00
427_S 41_I 0.79 0.00
39_V 176_I 0.79 0.00
209_P 212_E 0.79 0.00
348_M 206_Y 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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