May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

TOLQ - Protein TolQ
UniProt: P0ABU9 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG11010
Length: 230 (219)
Sequences: 2335
Seq/Len: 10.66

TOLQ
Paralog alert: 0.78 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: EXBB TOLQ
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
151_H 173_E 3.282 1.00
81_Q 119_E 3.189 1.00
35_I 191_A 3.022 1.00
132_T 190_M 3.015 1.00
61_E 64_R 2.847 1.00
134_G 189_V 2.616 1.00
38_R 41_I 2.538 1.00
36_I 40_R 2.53 1.00
31_S 188_A 2.45 1.00
132_T 193_N 2.251 1.00
20_I 143_F 2.25 1.00
182_L 186_I 2.236 1.00
129_F 133_V 2.208 1.00
120_L 203_E 1.917 1.00
127_I 199_V 1.841 1.00
85_S 115_S 1.728 1.00
152_A 170_G 1.637 1.00
139_Y 149_I 1.636 1.00
34_I 129_F 1.577 1.00
31_S 35_I 1.537 1.00
143_F 183_F 1.502 1.00
31_S 130_L 1.493 1.00
43_N 47_R 1.448 1.00
42_L 199_V 1.438 1.00
67_Q 71_G 1.423 1.00
174_A 178_T 1.407 0.99
13_A 21_M 1.402 0.99
154_I 172_A 1.4 0.99
24_L 184_A 1.399 0.99
146_V 178_T 1.398 0.99
52_F 56_F 1.397 0.99
10_F 18_K 1.38 0.99
150_M 179_A 1.371 0.99
64_R 67_Q 1.367 0.99
67_Q 70_Q 1.36 0.99
194_R 198_R 1.355 0.99
28_S 32_W 1.35 0.99
188_A 192_Y 1.345 0.99
13_A 169_P 1.326 0.99
44_A 48_E 1.311 0.99
10_F 21_M 1.295 0.99
27_F 140_I 1.287 0.99
86_G 112_M 1.273 0.99
153_F 170_G 1.253 0.99
115_S 119_E 1.251 0.99
139_Y 185_A 1.248 0.99
82_I 115_S 1.235 0.98
7_L 11_L 1.234 0.98
119_E 122_N 1.232 0.98
116_M 210_M 1.225 0.98
86_G 111_A 1.225 0.98
21_M 180_I 1.22 0.98
136_I 190_M 1.215 0.98
60_I 64_R 1.209 0.98
120_L 199_V 1.195 0.98
143_F 186_I 1.194 0.98
156_L 161_Q 1.192 0.98
156_L 163_T 1.172 0.98
149_I 175_L 1.164 0.97
118_R 208_N 1.157 0.97
59_G 65_L 1.149 0.97
90_F 93_L 1.143 0.97
65_L 69_S 1.143 0.97
24_L 28_S 1.133 0.97
83_F 209_F 1.133 0.97
133_V 188_A 1.12 0.96
28_S 33_A 1.11 0.96
29_I 33_A 1.105 0.96
46_A 198_R 1.091 0.96
147_W 179_A 1.084 0.96
98_S 101_P 1.08 0.95
22_L 26_G 1.073 0.95
169_P 172_A 1.073 0.95
134_G 187_P 1.072 0.95
135_S 189_V 1.068 0.95
37_Q 125_T 1.068 0.95
132_T 168_A 1.065 0.95
143_F 177_A 1.055 0.95
131_G 134_G 1.053 0.95
143_F 179_A 1.052 0.95
31_S 191_A 1.05 0.94
55_K 68_E 1.049 0.94
97_N 100_A 1.048 0.94
134_G 167_V 1.046 0.94
25_I 29_I 1.044 0.94
191_A 195_L 1.034 0.94
147_W 173_E 1.033 0.94
116_M 120_L 1.033 0.94
37_Q 41_I 1.027 0.94
51_A 55_K 1.023 0.93
142_L 185_A 1.021 0.93
44_A 47_R 1.021 0.93
14_S 151_H 1.015 0.93
14_S 147_W 1.011 0.93
179_A 183_F 1.01 0.93
124_E 207_D 1.008 0.93
128_P 197_Q 1.004 0.93
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
4i5sA20.96095.60.961Contact Map0.138
1ji6A10.39574.90.962Contact Map0.163
3b5mA40.27394.80.963Contact Map0.101
2nr4A20.37394.30.964Contact Map0
3zk1A220.34783.90.964Contact Map0.217
2c9kA10.46523.80.964Contact Map0.074
4jf3A20.23483.80.964Contact Map0
1pi7A10.15653.60.965Contact Map0.217
1ciyA10.417430.966Contact Map0.307
2x2vA130.256530.966Contact Map0.226

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0485 seconds.