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OPENSEQ.org

RUVB - RUVC
UniProt: P0A812 - P0A814
Length: 509
Sequences: 575
Seq/Len: 1.16
I_Prob: 0.00

RUVB - Holliday junction ATP-dependent DNA helicase RuvB
Paralog alert: 0.13 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: RUVB
RUVC - Crossover junction endodeoxyribonuclease RuvC
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RUVC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
35_P 29_L 1.26 0.00
91_L 114_I 1.22 0.00
139_I 152_H 1.20 0.00
90_V 81_L 1.17 0.00
259_E 149_T 1.14 0.00
84_R 90_V 1.12 0.00
150_I 110_T 1.10 0.00
93_K 105_R 1.10 0.00
41_M 11_S 1.10 0.00
141_E 81_L 1.10 0.00
102_T 102_Y 1.07 0.00
216_A 103_A 1.05 0.00
154_P 55_I 1.05 0.00
8_I 52_V 1.05 0.00
70_T 7_I 1.05 0.00
297_I 123_Q 1.04 0.00
169_S 78_A 1.04 0.00
254_L 85_R 1.04 0.00
276_F 126_V 1.04 0.00
54_A 129_L 1.01 0.00
125_V 105_R 1.01 0.00
135_L 90_V 1.01 0.00
149_K 11_S 1.01 0.00
85_T 90_V 1.00 0.00
295_E 26_L 1.00 0.00
256_V 126_V 1.00 0.00
149_K 12_R 0.99 0.00
29_E 57_T 0.99 0.00
261_F 89_I 0.98 0.00
202_L 62_D 0.98 0.00
128_P 102_Y 0.98 0.00
99_A 125_M 0.98 0.00
244_A 19_I 0.98 0.00
193_V 107_V 0.97 0.00
30_E 111_V 0.97 0.00
85_T 77_S 0.97 0.00
46_K 37_K 0.97 0.00
206_D 59_F 0.96 0.00
90_V 12_R 0.96 0.00
90_V 80_K 0.95 0.00
291_G 92_A 0.94 0.00
200_M 5_L 0.94 0.00
250_A 111_V 0.94 0.00
151_D 110_T 0.94 0.00
45_I 36_T 0.94 0.00
60_I 105_R 0.94 0.00
315_P 20_R 0.93 0.00
209_A 56_I 0.93 0.00
256_V 29_L 0.93 0.00
120_P 81_L 0.93 0.00
141_E 77_S 0.92 0.00
134_Q 12_R 0.92 0.00
100_M 156_N 0.92 0.00
55_L 16_Y 0.92 0.00
228_R 12_R 0.92 0.00
207_D 43_S 0.91 0.00
307_Q 106_Q 0.90 0.00
39_S 18_V 0.90 0.00
296_T 74_N 0.90 0.00
233_F 62_D 0.90 0.00
149_K 36_T 0.90 0.00
243_S 129_L 0.90 0.00
264_M 12_R 0.89 0.00
236_V 44_R 0.89 0.00
201_G 24_R 0.89 0.00
108_D 101_E 0.89 0.00
135_L 85_R 0.88 0.00
283_L 51_G 0.88 0.00
173_D 7_I 0.88 0.00
2_I 28_Y 0.88 0.00
128_P 85_R 0.87 0.00
90_V 137_Q 0.87 0.00
254_L 72_A 0.87 0.00
27_L 59_F 0.87 0.00
90_V 82_G 0.87 0.00
70_T 89_I 0.87 0.00
10_A 24_R 0.87 0.00
47_A 4_I 0.87 0.00
200_M 122_V 0.87 0.00
328_F 13_V 0.86 0.00
90_V 138_A 0.86 0.00
273_I 60_Q 0.86 0.00
119_S 68_Q 0.86 0.00
208_G 129_L 0.86 0.00
276_F 31_S 0.86 0.00
2_I 31_S 0.86 0.00
270_L 5_L 0.86 0.00
41_M 71_M 0.86 0.00
332_P 57_T 0.86 0.00
272_V 154_S 0.85 0.00
148_I 129_L 0.84 0.00
31_Y 11_S 0.83 0.00
125_V 110_T 0.83 0.00
267_K 62_D 0.83 0.00
190_Q 48_I 0.83 0.00
30_E 116_S 0.83 0.00
208_G 30_G 0.83 0.00
311_L 158_M 0.83 0.00
188_D 131_K 0.83 0.00
140_G 141_A 0.83 0.00
140_G 83_Q 0.82 0.00
141_E 31_S 0.82 0.00
201_G 40_D 0.82 0.00
207_D 128_T 0.82 0.00
269_L 98_P 0.82 0.00
183_F 82_G 0.82 0.00
59_L 139_D 0.82 0.00
295_E 82_G 0.81 0.00
167_L 83_Q 0.81 0.00
283_L 116_S 0.81 0.00
144_A 124_H 0.81 0.00
203_E 66_I 0.81 0.00
207_D 160_M 0.81 0.00
147_S 136_P 0.81 0.00
14_L 131_K 0.81 0.00
233_F 96_E 0.81 0.00
134_Q 14_T 0.80 0.00
166_S 82_G 0.80 0.00
95_G 125_M 0.80 0.00
7_L 118_E 0.80 0.00
183_F 14_T 0.80 0.00
316_R 139_D 0.80 0.00
216_A 75_A 0.80 0.00
168_T 102_Y 0.80 0.00
154_P 110_T 0.80 0.00
300_V 122_V 0.80 0.00
107_H 35_R 0.80 0.00
118_L 127_R 0.79 0.00
228_R 105_R 0.79 0.00
103_N 101_E 0.79 0.00
149_K 31_S 0.79 0.00
108_D 7_I 0.79 0.00
191_Y 159_Q 0.79 0.00
94_A 33_C 0.79 0.00
261_F 11_S 0.79 0.00
139_I 112_V 0.78 0.00
201_G 56_I 0.78 0.00
138_M 37_K 0.78 0.00
154_P 73_K 0.78 0.00
191_Y 99_V 0.78 0.00
93_K 109_Q 0.78 0.00
323_R 4_I 0.78 0.00
83_L 16_Y 0.77 0.00
206_D 60_Q 0.77 0.00
201_G 94_N 0.77 0.00
130_M 76_D 0.77 0.00
255_N 48_I 0.77 0.00
149_K 72_A 0.77 0.00
179_Q 68_Q 0.77 0.00
1_M 158_M 0.77 0.00
330_I 96_E 0.77 0.00
139_I 109_Q 0.77 0.00
242_I 37_K 0.77 0.00
20_D 74_N 0.77 0.00
128_P 101_E 0.76 0.00
192_I 7_I 0.76 0.00
23_I 105_R 0.76 0.00
15_P 89_I 0.76 0.00
192_I 149_T 0.76 0.00
134_Q 138_A 0.76 0.00
254_L 80_K 0.76 0.00
295_E 11_S 0.76 0.00
180_R 112_V 0.76 0.00
254_L 101_E 0.76 0.00
58_L 112_V 0.76 0.00
212_V 65_A 0.76 0.00
83_L 149_T 0.76 0.00
207_D 42_P 0.76 0.00
203_E 40_D 0.76 0.00
130_M 56_I 0.75 0.00
308_Q 52_V 0.75 0.00
147_S 141_A 0.75 0.00
204_M 62_D 0.75 0.00
38_R 11_S 0.75 0.00
186_V 128_T 0.75 0.00
222_I 39_D 0.75 0.00
224_N 132_L 0.75 0.00
44_F 101_E 0.75 0.00
169_S 99_V 0.75 0.00
42_E 96_E 0.75 0.00
244_A 98_P 0.75 0.00
40_Q 16_Y 0.75 0.00
326_N 50_A 0.75 0.00
177_I 14_T 0.75 0.00
331_T 161_S 0.74 0.00
238_H 58_Q 0.74 0.00
268_L 152_H 0.74 0.00
141_E 12_R 0.74 0.00
274_D 39_D 0.74 0.00
238_H 159_Q 0.74 0.00
194_S 106_Q 0.74 0.00
61_F 134_A 0.74 0.00
216_A 49_Y 0.74 0.00
188_D 48_I 0.74 0.00
94_A 111_V 0.74 0.00
138_M 32_G 0.74 0.00
100_M 68_Q 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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