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OPENSEQ.org

RS8 - SECY
UniProt: P0A7W7 - P0AGA2
Length: 573
Sequences: 1146
Seq/Len: 2.04
I_Prob: 0.10

RS8 - 30S ribosomal protein S8
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS8
SECY - Protein translocase subunit SecY
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
127_C 240_G 1.32 0.10
21_N 370_M 1.27 0.09
121_L 370_M 1.18 0.07
90_D 353_V 1.16 0.07
97_A 255_R 1.12 0.06
29_S 286_F 1.10 0.05
118_Q 363_A 1.09 0.05
14_I 37_S 1.08 0.05
55_T 72_L 1.06 0.05
31_K 272_A 1.05 0.05
17_G 183_I 1.02 0.04
76_Q 68_S 1.00 0.04
68_G 428_Q 0.99 0.04
118_Q 62_E 0.99 0.04
126_I 299_G 0.99 0.04
20_A 283_I 0.97 0.04
126_I 66_M 0.97 0.04
67_Q 220_L 0.96 0.03
27_M 364_K 0.96 0.03
21_N 132_S 0.95 0.03
61_L 231_T 0.95 0.03
110_V 22_R 0.95 0.03
113_D 166_T 0.94 0.03
103_V 296_G 0.94 0.03
97_A 49_L 0.94 0.03
78_V 162_V 0.93 0.03
127_C 258_Y 0.92 0.03
3_M 366_I 0.92 0.03
126_I 370_M 0.92 0.03
120_G 92_I 0.92 0.03
29_S 50_A 0.92 0.03
118_Q 27_I 0.91 0.03
57_P 174_L 0.91 0.03
110_V 281_S 0.91 0.03
19_A 222_L 0.89 0.03
110_V 353_V 0.89 0.03
107_S 76_S 0.89 0.03
10_M 345_N 0.89 0.03
104_V 283_I 0.88 0.03
101_I 419_Q 0.88 0.03
97_A 346_L 0.88 0.03
34_V 229_A 0.87 0.03
126_I 129_I 0.87 0.03
23_A 256_R 0.87 0.03
53_G 189_I 0.87 0.02
53_G 323_S 0.86 0.02
32_L 71_A 0.86 0.02
120_G 243_R 0.86 0.02
37_A 180_E 0.85 0.02
45_F 283_I 0.85 0.02
32_L 50_A 0.85 0.02
83_L 437_N 0.85 0.02
67_Q 18_E 0.85 0.02
23_A 290_I 0.85 0.02
68_G 68_S 0.84 0.02
110_V 235_V 0.84 0.02
78_V 368_K 0.84 0.02
103_V 360_E 0.84 0.02
78_V 344_D 0.84 0.02
22_K 97_V 0.84 0.02
75_I 116_I 0.83 0.02
110_V 203_I 0.83 0.02
80_R 406_L 0.82 0.02
89_K 158_F 0.82 0.02
78_V 222_L 0.82 0.02
91_E 160_A 0.82 0.02
129_V 366_I 0.82 0.02
72_V 268_K 0.82 0.02
17_G 435_K 0.82 0.02
86_Y 408_I 0.82 0.02
49_F 392_R 0.82 0.02
48_D 80_L 0.82 0.02
47_E 129_I 0.82 0.02
126_I 207_I 0.81 0.02
101_I 40_P 0.81 0.02
126_I 45_D 0.81 0.02
83_L 100_P 0.81 0.02
20_A 413_I 0.81 0.02
112_T 235_V 0.81 0.02
56_K 81_G 0.80 0.02
118_Q 294_F 0.80 0.02
118_Q 226_L 0.80 0.02
102_A 425_M 0.80 0.02
20_A 72_L 0.80 0.02
101_I 68_S 0.80 0.02
129_V 315_P 0.80 0.02
53_G 335_L 0.79 0.02
58_E 203_I 0.79 0.02
130_A 26_V 0.79 0.02
82_G 27_I 0.79 0.02
38_N 321_Y 0.79 0.02
37_A 117_S 0.79 0.02
104_V 259_A 0.78 0.02
30_S 403_G 0.78 0.02
17_G 62_E 0.78 0.02
8_A 76_S 0.78 0.02
88_R 405_S 0.78 0.02
130_A 411_V 0.78 0.02
89_K 250_K 0.78 0.02
120_G 341_E 0.77 0.02
29_S 382_T 0.77 0.02
127_C 44_I 0.77 0.02
2_S 366_I 0.77 0.02
39_V 71_A 0.77 0.02
31_K 91_I 0.77 0.02
61_L 159_T 0.76 0.02
79_S 408_I 0.76 0.02
91_E 306_I 0.76 0.02
120_G 63_M 0.76 0.02
61_L 128_A 0.76 0.02
107_S 153_G 0.76 0.02
61_L 432_A 0.76 0.02
124_E 408_I 0.76 0.02
7_I 382_T 0.76 0.02
129_V 234_V 0.76 0.02
117_R 213_G 0.76 0.02
45_F 88_A 0.75 0.01
45_F 159_T 0.75 0.01
67_Q 283_I 0.75 0.01
104_V 53_L 0.75 0.01
39_V 389_E 0.74 0.01
88_R 96_T 0.74 0.01
85_I 33_F 0.74 0.01
66_F 414_M 0.74 0.01
93_P 352_F 0.74 0.01
102_A 79_A 0.74 0.01
111_M 307_S 0.74 0.01
56_K 114_R 0.73 0.01
45_F 325_I 0.73 0.01
46_I 22_R 0.73 0.01
110_V 105_I 0.73 0.01
111_M 291_A 0.73 0.01
88_R 52_L 0.73 0.01
6_P 250_K 0.73 0.01
32_L 439_K 0.73 0.01
27_M 72_L 0.73 0.01
113_D 109_G 0.72 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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