| UniProt: | P0A7W7 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10907 | ||
| Length: | 130 (130) | ||
| Sequences: | 1779 | ||
| Seq/Len: | 13.68 |
| RS8
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 108_K | 119_A | 4.014 | 1.00 | |
| 41_K | 48_D | 3.772 | 1.00 | |
| 12_T | 15_R | 3.469 | 1.00 | |
| 89_K | 120_G | 3.363 | 1.00 | |
| 38_N | 42_E | 2.78 | 1.00 | |
| 42_E | 115_A | 2.543 | 1.00 | |
| 26_T | 60_E | 2.499 | 1.00 | |
| 35_A | 38_N | 2.49 | 1.00 | |
| 115_A | 119_A | 2.404 | 1.00 | |
| 113_D | 117_R | 2.361 | 1.00 | |
| 10_M | 37_A | 2.157 | 1.00 | |
| 7_I | 36_I | 2.082 | 1.00 | |
| 11_L | 127_C | 2.03 | 1.00 | |
| 74_S | 130_A | 2.026 | 1.00 | |
| 9_D | 13_R | 1.801 | 1.00 | |
| 46_I | 49_F | 1.793 | 1.00 | |
| 10_M | 27_M | 1.783 | 1.00 | |
| 40_L | 129_V | 1.774 | 1.00 | |
| 24_A | 62_T | 1.73 | 1.00 | |
| 38_N | 49_F | 1.724 | 1.00 | |
| 37_A | 61_L | 1.724 | 1.00 | |
| 17_G | 25_V | 1.618 | 1.00 | |
| 26_T | 58_E | 1.535 | 1.00 | |
| 18_Q | 70_A | 1.435 | 1.00 | |
| 88_R | 91_E | 1.413 | 1.00 | |
| 32_L | 126_I | 1.412 | 1.00 | |
| 6_P | 33_K | 1.412 | 1.00 | |
| 30_S | 33_K | 1.387 | 0.99 | |
| 27_M | 61_L | 1.386 | 0.99 | |
| 24_A | 60_E | 1.369 | 0.99 | |
| 7_I | 32_L | 1.368 | 0.99 | |
| 21_N | 68_G | 1.359 | 0.99 | |
| 50_K | 62_T | 1.354 | 0.99 | |
| 83_L | 128_Y | 1.352 | 0.99 | |
| 29_S | 34_V | 1.336 | 0.99 | |
| 52_E | 60_E | 1.291 | 0.99 | |
| 76_Q | 128_Y | 1.255 | 0.99 | |
| 39_V | 110_V | 1.237 | 0.98 | |
| 34_V | 51_V | 1.224 | 0.98 | |
| 110_V | 126_I | 1.186 | 0.98 | |
| 21_N | 70_A | 1.18 | 0.98 | |
| 87_K | 104_V | 1.178 | 0.98 | |
| 108_K | 121_L | 1.169 | 0.97 | |
| 102_A | 128_Y | 1.137 | 0.97 | |
| 69_K | 73_E | 1.135 | 0.97 | |
| 115_A | 118_Q | 1.125 | 0.97 | |
| 92_L | 104_V | 1.113 | 0.96 | |
| 86_Y | 124_E | 1.112 | 0.96 | |
| 6_P | 30_S | 1.095 | 0.96 | |
| 103_V | 129_V | 1.092 | 0.96 | |
| 34_V | 38_N | 1.091 | 0.96 | |
| 5_D | 77_R | 1.083 | 0.96 | |
| 29_S | 51_V | 1.064 | 0.95 | |
| 34_V | 59_L | 1.061 | 0.95 | |
| 96_M | 130_A | 1.059 | 0.95 | |
| 50_K | 60_E | 1.058 | 0.95 | |
| 111_M | 115_A | 1.057 | 0.95 | |
| 53_G | 57_P | 1.056 | 0.95 | |
| 41_K | 46_I | 1.053 | 0.95 | |
| 38_N | 41_K | 1.039 | 0.94 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2vqeH | 1 | 0.9923 | 100 | 0.026 | Contact Map | 0.895 |
| 1seiA | 2 | 0.9923 | 100 | 0.028 | Contact Map | 0.874 |
| 1s03H | 2 | 0.9923 | 100 | 0.031 | Contact Map | 0.752 |
| 3bbnH | 1 | 0.9923 | 100 | 0.057 | Contact Map | 0.685 |
| 3rf2A | 1 | 1 | 100 | 0.062 | Contact Map | 0.831 |
| 1i6uA | 2 | 0.9385 | 100 | 0.128 | Contact Map | 0.813 |
| 4bpeH | 1 | 0.9385 | 100 | 0.141 | Contact Map | 0.813 |
| 3u5cW | 1 | 0.9385 | 100 | 0.145 | Contact Map | 0.796 |
| 3qd7X | 1 | 0.5385 | 21.6 | 0.934 | Contact Map | 0.48 |
| 2vkcA | 1 | 0.4615 | 17.3 | 0.937 | Contact Map | 0.615 |
Sequence Conservation (Image Generated using WebLogo v3)