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OPENSEQ.org
RS2 - RSEP
UniProt: P0A7V0 - P0AEH1
Length: 691
Sequences: 540
Seq/Len: 0.80
I_Prob: 0.00
RS2 - 30S ribosomal protein S2
Paralog alert: 0.02 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RS2 		RSEP - Regulator of sigma E protease
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSEP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
207_I 27_F 1.45 0.00
185_A 414_I 1.44 0.00
91_F 93_S 1.42 0.00
184_F 237_K 1.32 0.00
161_L 250_D 1.29 0.00
9_M 386_I 1.29 0.00
207_I 59_Y 1.26 0.00
104_W 428_Y 1.25 0.00
163_V 370_M 1.25 0.00
104_W 56_G 1.22 0.00
67_I 373_E 1.22 0.00
104_W 75_E 1.20 0.00
117_L 5_L 1.20 0.00
107_V 398_L 1.19 0.00
166_A 389_N 1.17 0.00
90_F 389_N 1.14 0.00
91_F 36_R 1.14 0.00
65_G 406_L 1.13 0.00
146_N 348_L 1.11 0.00
83_A 428_Y 1.11 0.00
116_D 83_E 1.10 0.00
45_K 392_I 1.10 0.00
173_I 290_E 1.10 0.00
169_E 59_Y 1.09 0.00
65_G 11_F 1.08 0.00
157_L 30_A 1.08 0.00
62_S 155_D 1.07 0.00
180_G 274_L 1.07 0.00
30_F 144_Q 1.07 0.00
49_M 77_A 1.06 0.00
173_I 298_A 1.06 0.00
142_E 325_N 1.06 0.00
67_I 237_K 1.06 0.00
223_E 246_I 1.05 0.00
122_Q 109_F 1.05 0.00
210_V 413_K 1.04 0.00
130_T 174_G 1.04 0.00
177_N 21_V 1.03 0.00
59_K 392_I 1.03 0.00
5_S 282_P 1.02 0.00
75_A 28_W 1.02 0.00
184_F 96_Q 1.02 0.00
173_I 69_Y 1.01 0.00
137_R 302_V 1.01 0.00
30_F 106_V 1.01 0.00
169_E 134_I 1.00 0.00
184_F 348_L 1.00 0.00
91_F 292_K 1.00 0.00
225_R 14_A 1.00 0.00
186_I 332_D 0.99 0.00
38_V 389_N 0.99 0.00
55_A 8_L 0.99 0.00
67_I 319_R 0.98 0.00
146_N 71_K 0.98 0.00
34_A 362_I 0.98 0.00
163_V 414_I 0.97 0.00
185_A 228_N 0.96 0.00
115_K 355_L 0.95 0.00
152_K 434_L 0.94 0.00
194_D 144_Q 0.94 0.00
77_S 64_I 0.94 0.00
87_C 408_F 0.94 0.00
8_D 174_G 0.93 0.00
157_L 116_Y 0.93 0.00
214_L 408_F 0.93 0.00
115_K 441_L 0.93 0.00
160_A 71_K 0.93 0.00
82_D 62_A 0.92 0.00
107_V 125_P 0.92 0.00
100_M 111_F 0.92 0.00
163_V 323_P 0.91 0.00
91_F 230_Q 0.91 0.00
47_V 338_M 0.91 0.00
32_F 372_A 0.91 0.00
225_R 335_W 0.91 0.00
56_E 86_H 0.91 0.00
28_K 348_L 0.91 0.00
186_I 92_K 0.90 0.00
128_K 27_F 0.90 0.00
5_S 407_L 0.90 0.00
80_V 341_T 0.90 0.00
33_G 62_A 0.90 0.00
192_D 147_P 0.90 0.00
7_R 368_A 0.90 0.00
136_M 341_T 0.90 0.00
9_M 377_V 0.90 0.00
210_V 154_V 0.89 0.00
200_I 428_Y 0.89 0.00
30_F 429_R 0.89 0.00
159_D 351_G 0.89 0.00
87_C 369_G 0.89 0.00
100_M 36_R 0.89 0.00
110_S 62_A 0.89 0.00
21_R 72_M 0.88 0.00
142_E 434_L 0.88 0.00
29_P 425_D 0.88 0.00
161_L 245_R 0.87 0.00
198_F 273_A 0.87 0.00
183_V 379_Y 0.87 0.00
210_V 358_L 0.87 0.00
74_R 31_R 0.87 0.00
221_V 355_L 0.86 0.00
91_F 100_I 0.86 0.00
30_F 142_E 0.86 0.00
184_F 355_L 0.86 0.00
81_K 257_W 0.86 0.00
91_F 154_V 0.86 0.00
8_D 19_I 0.86 0.00
38_V 48_L 0.86 0.00
217_V 251_G 0.86 0.00
184_F 12_I 0.85 0.00
29_P 19_I 0.85 0.00
74_R 95_G 0.85 0.00
29_P 252_Q 0.85 0.00
80_V 408_F 0.85 0.00
163_V 313_D 0.84 0.00
163_V 69_Y 0.84 0.00
91_F 61_I 0.84 0.00
81_K 27_F 0.84 0.00
75_A 150_E 0.84 0.00
108_R 428_Y 0.84 0.00
170_H 398_L 0.84 0.00
184_F 285_L 0.84 0.00
218_A 391_G 0.84 0.00
117_L 54_K 0.84 0.00
142_E 247_V 0.84 0.00
186_I 101_I 0.83 0.00
122_Q 296_G 0.83 0.00
104_W 87_H 0.83 0.00
47_V 234_A 0.83 0.00
115_K 317_V 0.83 0.00
186_I 63_L 0.83 0.00
180_G 258_V 0.83 0.00
163_V 48_L 0.83 0.00
198_F 243_G 0.82 0.00
30_F 396_F 0.82 0.00
5_S 110_I 0.82 0.00
92_V 239_G 0.82 0.00
32_F 112_A 0.82 0.00
65_G 344_M 0.82 0.00
78_E 425_D 0.82 0.00
51_N 390_L 0.82 0.00
185_A 432_S 0.82 0.00
169_E 27_F 0.82 0.00
156_G 424_Q 0.82 0.00
91_F 324_F 0.82 0.00
14_V 119_V 0.82 0.00
184_F 152_K 0.81 0.00
208_R 129_P 0.81 0.00
4_V 289_P 0.81 0.00
153_D 154_V 0.81 0.00
46_T 264_V 0.81 0.00
3_T 155_D 0.81 0.00
206_A 337_L 0.81 0.00
156_G 109_F 0.81 0.00
164_I 224_P 0.81 0.00
120_Q 97_R 0.81 0.00
14_V 392_I 0.81 0.00
189_T 359_S 0.81 0.00
14_V 380_L 0.80 0.00
80_V 19_I 0.80 0.00
163_V 254_L 0.80 0.00
141_L 386_I 0.80 0.00
192_D 367_G 0.80 0.00
219_A 8_L 0.80 0.00
163_V 127_V 0.80 0.00
87_C 296_G 0.80 0.00
221_V 231_P 0.80 0.00
210_V 151_L 0.80 0.00
34_A 15_L 0.80 0.00
108_R 32_R 0.80 0.00
50_F 101_I 0.79 0.00
30_F 419_V 0.79 0.00
39_H 31_R 0.79 0.00
164_I 433_I 0.79 0.00
45_K 436_V 0.79 0.00
44_E 38_E 0.79 0.00
187_V 407_L 0.79 0.00
147_S 31_R 0.79 0.00
29_P 380_L 0.79 0.00
183_V 321_Y 0.79 0.00
153_D 109_F 0.79 0.00
9_M 352_D 0.78 0.00
78_E 150_E 0.78 0.00
74_R 429_R 0.78 0.00
163_V 287_L 0.78 0.00
78_E 224_P 0.78 0.00
199_V 116_Y 0.78 0.00
107_V 184_P 0.78 0.00
180_G 246_I 0.78 0.00
219_A 330_A 0.78 0.00
206_A 198_R 0.78 0.00
8_D 340_L 0.78 0.00
173_I 8_L 0.78 0.00
48_P 424_Q 0.78 0.00
116_D 332_D 0.78 0.00
221_V 259_T 0.78 0.00
153_D 265_R 0.78 0.00
121_S 59_Y 0.78 0.00
139_R 436_V 0.78 0.00
38_V 46_K 0.77 0.00
195_G 100_I 0.77 0.00
78_E 287_L 0.77 0.00
226_S 345_L 0.77 0.00
185_A 296_G 0.77 0.00
61_A 155_D 0.77 0.00
217_V 86_H 0.77 0.00
194_D 152_K 0.77 0.00
127_D 270_K 0.77 0.00
183_V 95_G 0.76 0.00
209_A 399_P 0.76 0.00
124_G 103_A 0.76 0.00
116_D 349_I 0.76 0.00
187_V 375_G 0.76 0.00
159_D 94_V 0.76 0.00
89_Q 98_A 0.76 0.00
21_R 344_M 0.76 0.00
164_I 95_G 0.76 0.00
200_I 148_G 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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