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OPENSEQ.org

PYRH - YAER
UniProt: P0A7E9 - P52096
Length: 370
Sequences: 230
Seq/Len: 0.63
I_Prob: 0.00

PYRH - Uridylate kinase
Paralog alert: 0.90 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: PYRH
YAER - Uncharacterized protein YaeR
Paralog alert: 0.72 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: LGUL YAER
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
122_A 56_I 1.38 0.00
156_I 126_L 1.37 0.00
41_I 91_A 1.18 0.00
219_N 91_A 1.17 0.00
156_I 24_Y 1.15 0.00
170_V 110_Q 1.14 0.00
10_K 10_I 1.10 0.00
105_M 56_I 1.08 0.00
42_K 22_A 1.07 0.00
187_L 7_V 1.07 0.00
12_I 26_D 1.07 0.00
60_L 56_I 0.94 0.00
42_K 18_A 0.93 0.00
213_L 84_D 0.90 0.00
192_V 18_A 0.88 0.00
194_E 85_D 0.87 0.00
196_E 23_F 0.87 0.00
179_P 31_T 0.87 0.00
52_G 31_T 0.86 0.00
179_P 12_I 0.86 0.00
29_I 68_P 0.85 0.00
172_T 95_S 0.85 0.00
168_D 97_N 0.85 0.00
117_Y 100_C 0.84 0.00
164_A 12_I 0.82 0.00
217_V 12_I 0.82 0.00
39_Q 18_A 0.81 0.00
34_L 124_L 0.79 0.00
167_V 84_D 0.79 0.00
136_A 92_H 0.79 0.00
133_I 126_L 0.78 0.00
192_V 16_D 0.78 0.00
29_I 110_Q 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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