May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

HSCB - ISCR
UniProt: P0A6L9 - P0AGK8
Length: 333
Sequences: 209
Seq/Len: 0.67
I_Prob: 0.10

HSCB - Co-chaperone protein HscB
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: HSCB
ISCR - HTH-type transcriptional regulator IscR
Paralog alert: 0.58 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ISCR NSRR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
41_Q 87_V 1.81 0.10
88_D 9_Y 1.71 0.08
121_V 76_V 1.45 0.04
44_Q 130_V 1.40 0.03
88_D 114_S 1.31 0.03
8_G 124_I 1.31 0.03
153_F 114_S 1.25 0.02
167_K 143_H 1.23 0.02
44_Q 36_G 1.21 0.02
1_M 101_G 1.21 0.02
3_Y 17_V 1.20 0.02
70_Y 17_V 1.19 0.02
145_A 26_V 1.19 0.02
54_I 116_R 1.18 0.02
56_Q 17_V 1.15 0.01
162_E 68_G 1.15 0.01
2_D 78_E 1.14 0.01
135_Q 73_S 1.14 0.01
151_L 85_E 1.14 0.01
71_L 2_R 1.11 0.01
35_K 5_S 1.07 0.01
167_K 125_T 1.07 0.01
165_E 105_L 1.06 0.01
137_D 9_Y 1.06 0.01
152_R 117_L 1.04 0.01
72_L 89_A 1.04 0.01
42_A 79_V 1.04 0.01
88_D 105_L 1.03 0.01
95_Q 32_S 1.03 0.01
35_K 93_Q 1.02 0.01
47_A 32_S 1.01 0.01
88_D 30_D 1.01 0.01
104_E 73_S 1.00 0.01
93_M 61_P 1.00 0.01
110_D 15_L 0.98 0.01
83_Q 48_R 0.98 0.01
51_S 82_A 0.98 0.01
69_E 5_S 0.98 0.01
155_D 48_R 0.97 0.01
90_A 91_R 0.96 0.01
62_R 32_S 0.96 0.01
1_M 17_V 0.96 0.01
154_L 70_D 0.96 0.01
130_Q 48_R 0.96 0.01
98_L 26_V 0.95 0.01
27_L 105_L 0.95 0.01
95_Q 61_P 0.95 0.01
28_Q 26_V 0.95 0.01
140_T 30_D 0.95 0.01
72_L 142_Q 0.94 0.01
70_Y 93_Q 0.94 0.01
6_L 4_T 0.94 0.01
39_G 32_S 0.93 0.01
69_E 76_V 0.93 0.01
56_Q 51_K 0.93 0.01
154_L 22_E 0.92 0.01
48_V 32_S 0.92 0.01
56_Q 5_S 0.92 0.01
93_M 37_I 0.92 0.01
117_F 97_G 0.92 0.01
91_F 12_T 0.92 0.01
1_M 5_S 0.92 0.01
21_S 79_V 0.91 0.01
23_R 130_V 0.91 0.01
135_Q 79_V 0.91 0.01
92_L 37_I 0.91 0.01
170_D 19_L 0.91 0.01
169_L 74_I 0.90 0.01
43_E 128_E 0.90 0.01
120_R 125_T 0.90 0.01
165_E 9_Y 0.90 0.01
11_A 123_N 0.89 0.01
71_L 5_S 0.89 0.01
166_E 96_G 0.88 0.01
100_E 61_P 0.88 0.01
95_Q 39_L 0.88 0.01
91_F 28_L 0.88 0.01
87_R 9_Y 0.88 0.01
149_R 88_D 0.88 0.01
85_T 39_L 0.88 0.01
45_L 51_K 0.87 0.01
95_Q 62_G 0.87 0.01
63_H 17_V 0.87 0.01
37_A 89_A 0.87 0.01
47_A 77_G 0.87 0.01
103_D 72_S 0.87 0.01
114_L 125_T 0.86 0.01
71_L 48_R 0.86 0.01
141_W 79_V 0.86 0.01
89_T 17_V 0.86 0.01
59_Q 129_L 0.86 0.01
29_R 120_F 0.86 0.01
3_Y 128_E 0.86 0.01
86_V 9_Y 0.85 0.01
85_T 6_K 0.85 0.01
51_S 84_D 0.85 0.01
89_T 97_G 0.85 0.01
93_M 62_G 0.85 0.01
104_E 26_V 0.85 0.01
35_K 14_M 0.84 0.01
7_F 70_D 0.84 0.01
155_D 79_V 0.84 0.01
133_V 76_V 0.84 0.01
52_A 58_V 0.84 0.01
27_L 124_I 0.83 0.01
144_A 106_T 0.83 0.01
53_T 47_S 0.83 0.01
154_L 115_D 0.83 0.01
47_A 118_T 0.83 0.01
102_L 80_I 0.83 0.00
150_K 117_L 0.83 0.00
35_K 78_E 0.83 0.00
100_E 39_L 0.83 0.00
96_L 37_I 0.82 0.00
143_A 125_T 0.82 0.00
6_L 88_D 0.82 0.00
95_Q 6_K 0.82 0.00
76_G 94_G 0.82 0.00
88_D 135_V 0.81 0.00
50_Q 91_R 0.81 0.00
15_L 21_S 0.81 0.00
70_Y 2_R 0.81 0.00
145_A 89_A 0.81 0.00
44_Q 137_D 0.81 0.00
123_K 130_V 0.81 0.00
99_R 94_G 0.81 0.00
160_S 48_R 0.81 0.00
163_Q 124_I 0.80 0.00
105_I 120_F 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0333 seconds.