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OPENSEQ.org

CLPP - DBHB
UniProt: P0A6G7 - P0ACF4
Length: 297
Sequences: 209
Seq/Len: 0.73
I_Prob: 0.00

CLPP - ATP-dependent Clp protease proteolytic subunit
Paralog alert: 0.34 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: CLPP
DBHB - DNA-binding protein HU-beta
Paralog alert: 0.56 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: DBHA DBHB IHFA IHFB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
75_L 64_Q 1.38 0.00
160_K 64_Q 1.33 0.00
25_S 78_S 1.29 0.00
15_A 53_K 1.29 0.00
50_E 90_N 1.11 0.00
30_S 45_V 1.11 0.00
173_Q 69_I 1.09 0.00
127_C 10_I 1.09 0.00
178_I 35_S 1.06 0.00
55_N 58_R 1.02 0.00
58_V 58_R 1.01 0.00
75_L 76_V 1.00 0.00
30_S 51_A 0.98 0.00
204_T 81_A 0.96 0.00
133_V 78_S 0.96 0.00
15_A 5_Q 0.96 0.00
159_V 25_L 0.95 0.00
106_M 9_K 0.94 0.00
24_T 80_R 0.94 0.00
48_Q 76_V 0.94 0.00
66_A 67_K 0.94 0.00
196_Y 58_R 0.94 0.00
46_T 5_Q 0.93 0.00
45_L 56_A 0.92 0.00
106_M 7_I 0.90 0.00
42_V 24_A 0.90 0.00
154_R 25_L 0.89 0.00
74_Y 9_K 0.89 0.00
133_V 53_K 0.88 0.00
43_I 90_N 0.88 0.00
181_D 58_R 0.88 0.00
199_V 22_G 0.88 0.00
66_A 38_E 0.87 0.00
194_V 29_I 0.86 0.00
70_E 5_Q 0.86 0.00
203_L 59_T 0.86 0.00
119_A 37_K 0.85 0.00
61_M 5_Q 0.85 0.00
139_L 53_K 0.85 0.00
177_Q 56_A 0.85 0.00
167_M 43_A 0.84 0.00
178_I 32_V 0.84 0.00
66_A 27_A 0.83 0.00
66_A 80_R 0.83 0.00
149_I 27_A 0.83 0.00
158_K 72_A 0.83 0.00
126_F 38_E 0.83 0.00
57_I 39_G 0.83 0.00
21_I 30_A 0.82 0.00
49_V 19_A 0.82 0.00
110_A 78_S 0.82 0.00
49_V 65_T 0.82 0.00
104_I 67_K 0.81 0.00
66_A 31_S 0.81 0.00
17_V 32_V 0.81 0.00
104_I 53_K 0.81 0.00
169_L 15_D 0.80 0.00
83_V 41_D 0.79 0.00
89_S 53_K 0.79 0.00
17_V 40_D 0.79 0.00
154_R 12_A 0.79 0.00
202_I 61_R 0.79 0.00
25_S 53_K 0.79 0.00
100_D 35_S 0.79 0.00
53_M 67_K 0.78 0.00
24_T 7_I 0.77 0.00
196_Y 8_D 0.77 0.00
72_D 20_A 0.77 0.00
45_L 75_K 0.77 0.00
88_M 42_V 0.77 0.00
159_V 70_T 0.77 0.00
180_R 89_V 0.76 0.00
139_L 54_E 0.76 0.00
128_L 58_R 0.76 0.00
25_S 4_S 0.76 0.00
114_A 29_I 0.76 0.00
70_E 8_D 0.76 0.00
118_T 29_I 0.76 0.00
199_V 84_A 0.76 0.00
86_A 15_D 0.76 0.00
40_E 88_A 0.75 0.00
112_M 77_P 0.75 0.00
114_A 41_D 0.75 0.00
175_L 31_S 0.75 0.00
143_Q 26_D 0.75 0.00
196_Y 43_A 0.74 0.00
152_H 39_G 0.74 0.00
21_I 59_T 0.74 0.00
143_Q 77_P 0.73 0.00
131_S 64_Q 0.73 0.00
192_E 72_A 0.73 0.00
34_Y 59_T 0.73 0.00
42_V 8_D 0.73 0.00
176_E 54_E 0.73 0.00
119_A 78_S 0.73 0.00
115_F 51_A 0.73 0.00
14_M 84_A 0.73 0.00
201_S 30_A 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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