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OPENSEQ.org
KDSB - LPXK
UniProt: P04951 - P27300
Length: 576
Sequences: 384
Seq/Len: 0.67
I_Prob: 0.00
KDSB - 3-deoxy-manno-octulosonate cytidylyltransferase
Paralog alert: 0.32 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: KDSB 		LPXK - Tetraacyldisaccharide 4'-kinase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LPXK
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
82_V 239_G 1.49 0.00
14_T 194_V 1.23 0.00
55_A 13_W 1.15 0.00
97_V 54_L 1.12 0.00
192_I 184_R 1.12 0.00
193_R 82_V 1.11 0.00
67_M 282_L 1.11 0.00
137_F 197_N 1.10 0.00
225_V 81_V 1.08 0.00
54_V 59_N 1.05 0.00
65_V 110_P 1.05 0.00
82_V 165_D 1.05 0.00
222_H 284_M 1.01 0.00
195_Y 307_A 1.00 0.00
5_V 23_Y 1.00 0.00
67_M 303_L 0.98 0.00
36_R 49_V 0.98 0.00
247_M 317_L 0.98 0.00
199_Q 161_I 0.98 0.00
132_N 144_I 0.98 0.00
214_V 81_V 0.98 0.00
148_A 54_L 0.97 0.00
30_I 161_I 0.97 0.00
182_L 59_N 0.97 0.00
200_P 111_V 0.97 0.00
49_T 239_G 0.96 0.00
226_A 22_L 0.96 0.00
193_R 54_L 0.96 0.00
123_M 268_N 0.96 0.00
14_T 213_G 0.94 0.00
147_D 295_F 0.94 0.00
14_T 170_F 0.93 0.00
22_V 258_C 0.93 0.00
51_H 193_A 0.92 0.00
180_R 290_V 0.92 0.00
123_M 286_E 0.92 0.00
89_S 49_V 0.92 0.00
191_F 162_V 0.91 0.00
52_E 193_A 0.90 0.00
58_V 164_I 0.90 0.00
14_T 24_G 0.90 0.00
224_A 104_A 0.90 0.00
186_G 56_A 0.90 0.00
51_H 201_P 0.90 0.00
194_R 318_L 0.90 0.00
136_A 54_L 0.90 0.00
127_A 46_V 0.89 0.00
11_Y 261_L 0.89 0.00
234_V 113_I 0.88 0.00
69_R 319_T 0.88 0.00
77_E 59_N 0.88 0.00
179_L 8_G 0.88 0.00
42_A 243_R 0.88 0.00
58_V 143_I 0.88 0.00
140_N 80_G 0.88 0.00
28_P 112_L 0.87 0.00
94_I 175_W 0.87 0.00
162_W 292_C 0.87 0.00
118_Q 78_R 0.87 0.00
222_H 302_Y 0.87 0.00
126_L 94_P 0.87 0.00
245_A 41_A 0.87 0.00
129_P 161_I 0.87 0.00
20_P 171_G 0.87 0.00
178_F 164_I 0.86 0.00
7_I 227_A 0.86 0.00
233_G 289_A 0.86 0.00
92_T 232_V 0.86 0.00
27_K 170_F 0.86 0.00
154_Y 208_M 0.85 0.00
219_E 153_Y 0.85 0.00
122_G 23_Y 0.85 0.00
154_Y 252_G 0.85 0.00
20_P 165_D 0.85 0.00
112_V 94_P 0.85 0.00
182_L 260_P 0.84 0.00
126_L 122_A 0.84 0.00
46_I 141_V 0.84 0.00
126_L 168_R 0.84 0.00
111_Q 188_L 0.84 0.00
28_P 245_F 0.83 0.00
5_V 292_C 0.83 0.00
216_W 236_A 0.83 0.00
90_D 225_D 0.83 0.00
93_V 112_L 0.83 0.00
184_I 301_W 0.83 0.00
121_V 134_I 0.82 0.00
241_E 161_I 0.82 0.00
149_E 317_L 0.82 0.00
52_E 232_V 0.82 0.00
6_I 124_S 0.82 0.00
82_V 88_G 0.82 0.00
82_V 188_L 0.82 0.00
39_E 253_V 0.82 0.00
93_V 113_I 0.82 0.00
112_V 125_P 0.82 0.00
137_F 208_M 0.81 0.00
14_T 268_N 0.81 0.00
192_I 59_N 0.81 0.00
6_I 126_V 0.81 0.00
126_L 188_L 0.81 0.00
82_V 305_V 0.81 0.00
85_K 162_V 0.81 0.00
45_I 222_T 0.81 0.00
126_L 284_M 0.81 0.00
216_W 286_E 0.81 0.00
83_V 124_S 0.81 0.00
24_I 318_L 0.81 0.00
178_F 17_L 0.81 0.00
32_H 317_L 0.81 0.00
135_E 233_V 0.81 0.00
118_Q 38_L 0.80 0.00
163_D 125_P 0.80 0.00
219_E 54_L 0.80 0.00
84_E 49_V 0.80 0.00
203_L 79_V 0.80 0.00
208_M 181_M 0.80 0.00
24_I 295_F 0.80 0.00
25_N 191_V 0.80 0.00
34_L 261_L 0.80 0.00
231_G 40_R 0.80 0.00
159_T 81_V 0.80 0.00
203_L 272_V 0.80 0.00
93_V 272_V 0.79 0.00
231_G 253_V 0.79 0.00
194_R 78_R 0.79 0.00
172_E 323_L 0.79 0.00
186_G 272_V 0.79 0.00
73_Q 295_F 0.79 0.00
14_T 255_P 0.79 0.00
158_A 234_A 0.79 0.00
93_V 141_V 0.79 0.00
92_T 324_L 0.79 0.00
203_L 77_I 0.79 0.00
169_E 35_K 0.78 0.00
109_I 131_V 0.78 0.00
111_Q 239_G 0.78 0.00
243_V 67_W 0.78 0.00
127_A 223_R 0.78 0.00
231_G 23_Y 0.78 0.00
205_H 37_K 0.78 0.00
42_A 245_F 0.78 0.00
54_V 262_A 0.77 0.00
4_V 97_L 0.77 0.00
109_I 260_P 0.77 0.00
214_V 68_L 0.77 0.00
175_G 195_I 0.77 0.00
25_N 79_V 0.77 0.00
111_Q 94_P 0.77 0.00
112_V 210_L 0.77 0.00
129_P 75_R 0.77 0.00
136_A 185_A 0.77 0.00
85_K 211_L 0.77 0.00
82_V 170_F 0.77 0.00
137_F 245_F 0.77 0.00
82_V 171_G 0.77 0.00
238_E 315_A 0.77 0.00
162_W 245_F 0.77 0.00
217_Y 309_L 0.77 0.00
132_N 212_P 0.77 0.00
158_A 187_R 0.77 0.00
61_A 7_S 0.76 0.00
80_A 70_E 0.76 0.00
198_W 55_T 0.76 0.00
109_I 40_R 0.76 0.00
65_V 93_Y 0.76 0.00
42_A 284_M 0.76 0.00
109_I 54_L 0.76 0.00
6_I 175_W 0.76 0.00
237_P 143_I 0.76 0.00
217_Y 64_V 0.76 0.00
141_A 199_G 0.76 0.00
14_T 298_E 0.76 0.00
94_I 209_H 0.75 0.00
180_R 160_E 0.75 0.00
79_L 106_A 0.75 0.00
82_V 153_Y 0.75 0.00
14_T 320_Q 0.75 0.00
208_M 43_R 0.75 0.00
49_T 188_L 0.75 0.00
29_M 289_A 0.75 0.00
89_S 315_A 0.75 0.00
27_K 303_L 0.75 0.00
192_I 145_V 0.75 0.00
82_V 97_L 0.75 0.00
126_L 165_D 0.75 0.00
197_N 81_V 0.75 0.00
67_M 176_L 0.75 0.00
232_T 209_H 0.75 0.00
150_G 158_D 0.75 0.00
89_S 196_V 0.75 0.00
129_P 324_L 0.75 0.00
95_V 160_E 0.74 0.00
160_I 17_L 0.74 0.00
192_I 27_S 0.74 0.00
40_S 194_V 0.74 0.00
220_K 195_I 0.74 0.00
31_V 7_S 0.74 0.00
147_D 126_V 0.74 0.00
67_M 161_I 0.74 0.00
43_E 173_G 0.74 0.00
24_I 73_Q 0.74 0.00
126_L 68_L 0.74 0.00
13_S 54_L 0.74 0.00
222_H 292_C 0.74 0.00
245_A 268_N 0.74 0.00
201_S 97_L 0.74 0.00
229_V 161_I 0.74 0.00
126_L 302_Y 0.74 0.00
43_E 104_A 0.74 0.00
171_L 21_W 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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