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DNAA - RL34
UniProt: P03004 - P0A7P5
Length: 513
Sequences: 384
Seq/Len: 0.76
I_Prob: 0.00

DNAA - Chromosomal replication initiator protein DnaA
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: DNAA
RL34 - 50S ribosomal protein L34
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL34
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
55_Y 26_N 1.37 0.00
31_A 12_R 1.32 0.00
280_D 31_L 1.23 0.00
217_N 26_N 1.19 0.00
441_C 33_R 1.17 0.00
314_D 33_R 1.11 0.00
333_V 8_S 1.10 0.00
338_G 16_H 1.06 0.00
270_R 11_K 1.05 0.00
237_I 43_T 1.04 0.00
238_Q 16_H 1.02 0.00
368_A 33_R 1.01 0.00
385_E 5_F 0.99 0.00
26_I 20_A 0.97 0.00
413_L 44_V 0.97 0.00
137_T 43_T 0.95 0.00
284_S 31_L 0.94 0.00
141_F 19_R 0.94 0.00
449_E 5_F 0.93 0.00
280_D 13_N 0.93 0.00
133_N 10_L 0.92 0.00
252_H 26_N 0.92 0.00
404_A 40_A 0.92 0.00
431_G 13_N 0.90 0.00
443_K 19_R 0.90 0.00
299_L 9_V 0.89 0.00
427_D 31_L 0.89 0.00
201_M 11_K 0.89 0.00
310_A 12_R 0.89 0.00
301_T 19_R 0.88 0.00
35_D 24_T 0.88 0.00
273_K 31_L 0.88 0.00
400_S 5_F 0.87 0.00
272_P 16_H 0.87 0.00
203_S 16_H 0.86 0.00
162_G 32_A 0.85 0.00
146_S 32_A 0.85 0.00
17_L 23_A 0.85 0.00
389_I 24_T 0.84 0.00
464_T 3_R 0.84 0.00
196_A 30_V 0.84 0.00
288_W 16_H 0.83 0.00
455_K 26_N 0.83 0.00
424_E 36_A 0.83 0.00
366_L 22_M 0.83 0.00
150_A 1_M 0.83 0.00
214_L 19_R 0.83 0.00
282_L 14_R 0.82 0.00
463_R 19_R 0.82 0.00
184_A 3_R 0.81 0.00
346_N 23_A 0.81 0.00
346_N 36_A 0.81 0.00
65_S 33_R 0.81 0.00
461_L 23_A 0.81 0.00
39_A 9_V 0.80 0.00
132_V 1_M 0.80 0.00
24_M 23_A 0.80 0.00
250_F 16_H 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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