| UniProt: | P0A7P5 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10892 | ||
| Length: | 46 (45) | ||
| Sequences: | 664 | ||
| Seq/Len: | 14.76 |
| RL34
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 8_S | 14_R | 3.215 | 1.00 | |
| 11_K | 15_S | 3.116 | 1.00 | |
| 8_S | 11_K | 2.786 | 1.00 | |
| 10_L | 14_R | 2.433 | 1.00 | |
| 3_R | 6_Q | 2.299 | 1.00 | |
| 29_Q | 33_R | 2.096 | 1.00 | |
| 25_K | 29_Q | 1.802 | 1.00 | |
| 2_K | 6_Q | 1.711 | 1.00 | |
| 19_R | 22_M | 1.596 | 1.00 | |
| 33_R | 36_A | 1.591 | 1.00 | |
| 20_A | 23_A | 1.589 | 1.00 | |
| 22_M | 31_L | 1.557 | 1.00 | |
| 6_Q | 16_H | 1.53 | 1.00 | |
| 29_Q | 32_A | 1.443 | 1.00 | |
| 26_N | 30_V | 1.409 | 1.00 | |
| 32_A | 36_A | 1.309 | 0.99 | |
| 5_F | 9_V | 1.167 | 0.97 | |
| 9_V | 13_N | 1.155 | 0.97 | |
| 41_R | 44_V | 1.113 | 0.96 | |
| 8_S | 15_S | 1.099 | 0.96 | |
| 15_S | 20_A | 1.084 | 0.96 | |
| 7_P | 16_H | 1.075 | 0.95 | |
| 5_F | 12_R | 1.071 | 0.95 | |
| 36_A | 41_R | 1.047 | 0.94 | |
| 22_M | 32_A | 1.01 | 0.93 | |
| 10_L | 23_A | 1.009 | 0.93 | |
| 31_L | 43_T | 1.007 | 0.93 | |
| 4_T | 7_P | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kix2 | 1 | 1 | 99.8 | 0.014 | Contact Map | 0.605 |
| 3v2d7 | 1 | 1 | 99.8 | 0.016 | Contact Map | 0.585 |
| 3j3w2 | 1 | 0.9565 | 99.7 | 0.053 | Contact Map | 0.458 |
| 3bbo4 | 1 | 1 | 99.6 | 0.144 | Contact Map | 0.498 |
| 2ftcQ | 1 | 0.8261 | 99.5 | 0.212 | Contact Map | 0.013 |
| 4hhjA | 1 | 0.7826 | 2.6 | 0.898 | Contact Map | 0.301 |
| 2jpjA | 1 | 0.3478 | 1.4 | 0.912 | Contact Map | 0.38 |
| 1ds1A | 1 | 0.6522 | 1.3 | 0.914 | Contact Map | 0.127 |
| 1p7bA | 2 | 0.8043 | 1.2 | 0.916 | Contact Map | 0.266 |
| 3cf4A | 1 | 0.3696 | 1.2 | 0.916 | Contact Map | 0.131 |
Sequence Conservation (Image Generated using WebLogo v3)